RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 KLF10Q13118 480 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 EFNB3Q15768 340 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 GSG1Q2KHT4 349 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 TMEM249Q2WGJ8 235 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 OXLD1Q5BKU9 147 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 ERICH5Q6P6B1 374 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 HIST3H2AQ7L7L0 130 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 NANOGNBQ7Z5D8 188 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 MYPOPQ86VE0 399 aaPredicted RBP10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 CARM1Q86X55 608 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 PCYOX1LQ8NBM8 494 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 IL17RDQ8NFM7 739 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 C10orf105Q8TEF2 133 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 HIST1H2ACQ93077 130 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 SORCS2Q96PQ0 1159 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 TNFRSF13CQ96RJ3 184 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 FOXB1Q99853 325 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 VRK1Q99986 396 aaPredicted RBP10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 ZNF442Q9H7R0 627 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 SAR1AQ9NR31 198 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 ZNF229Q9UJW7 825 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 FBXO9Q9UK97 447 aaPredicted RBP10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 BAG5Q9UL15 447 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 SH3GLB1Q9Y371 365 aa10.72□□□□□ -0.69
CTDNEP1-205ENST00000570828 ATRQ13535 2644 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 A8MV72 311 aaPredicted RBP10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 GPRIN2O60269 458 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 ENTPD5O75356 428 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 LYPD3O95274 346 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 RAB36O95755 333 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 IFNA14P01570 189 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 ERCC1P07992 297 aaPredicted RBP10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 PPOXP50336 477 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 PDLIM4P50479 330 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 CRYBA2P53672 197 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 HGFACQ04756 655 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 SNTB2Q13425 540 aaKnown RBP10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 CARTPTQ16568 116 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 LRRC23Q53EV4 343 aaPredicted RBP10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 HSP90B2PQ58FF3 399 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 NHLRC1Q6VVB1 395 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 DEF8Q6ZN54 512 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 SLC35D2Q76EJ3 337 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 ZNF627Q7L945 461 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 TSPYL5Q86VY4 417 aaPredicted RBP10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 CALHM3Q86XJ0 350 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 ANKS4BQ8N8V4 417 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 OR6X1Q8NH79 312 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 ZNF566Q969W8 418 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 PIMREGQ9BSJ6 248 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 ZNF426Q9BUY5 554 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 PLK3Q9H4B4 646 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 NOX3Q9HBY0 568 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 MYOZ1Q9NP98 299 aaPredicted RBP10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 GID8Q9NWU2 228 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 CAPN7Q9Y6W3 813 aa10.71□□□□□ -0.69
CTDNEP1-205ENST00000570828 ANK3Q12955 4377 aaKnown RBP10.71□□□□□ -0.7
CTDNEP1-205ENST00000570828 LOC100653049A0A140TA62 436 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 KIAA1324LA8MWY0 1029 aaPredicted RBP10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 hCG_2039718K7EN88 272 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 NDUFS8O00217 210 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 KRT34O76011 436 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 OR5F1O95221 314 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 TNFRSF1BP20333 461 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 NPR2P20594 1047 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 USF1P22415 310 aaPredicted RBP10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 THBS4P35443 961 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 RBM34P42696 430 aaKnown RBP10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 PTDSS1P48651 473 aaKnown RBP10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 VLDLRP98155 873 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 PIGFQ07326 219 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 ZP4Q12836 540 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 DAG1Q14118 895 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 MELKQ14680 651 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 C6orf52Q5T4I8 152 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 KRT80Q6KB66 452 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 CGB2Q6NT52 195 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 SPATA21Q7Z572 469 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 WDFY1Q8IWB7 410 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 SVOPLQ8N434 492 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 LRRC17Q8N6Y2 441 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 C10orf82Q8WW14 230 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 SLC25A44Q96H78 314 aaPredicted RBP10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 POLR2J2Q9GZM3 115 aaKnown RBP10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 RAB1BQ9H0U4 201 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 POLR2J3Q9H1A7 115 aaKnown RBP10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 DENND2DQ9H6A0 471 aaPredicted RBP10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 DYNLRB1Q9NP97 96 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 B3GNT2Q9NY97 397 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 TAS2R5Q9NYW4 299 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 GLTPQ9NZD2 209 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 ADAM21Q9UKJ8 722 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 FBXL3Q9UKT7 428 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 SPEF1Q9Y4P9 236 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 ABCA1O95477 2261 aa10.7□□□□□ -0.7
CTDNEP1-205ENST00000570828 ALPK2Q86TB3 2170 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 FAM220BPB1ANY3 271 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 MCIDASD6RGH6 385 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 BLOC1S5-TXNDC5H3BN57 136 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 SLC22A2O15244 555 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms