RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 RIIAD1A6NNX1 92 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 RPL36A-HNRNPH2H7BZ11 118 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 SLC16A6O15403 523 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 MITFO75030 526 aaPredicted RBP20.76■□□□□ 0.91
RAB40C-212ENST00000569575 PGA4P0DJD7 388 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 PGA3P0DJD8 388 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 PLA2G2AP14555 144 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 HSPA13P48723 471 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 CSNK1A1P48729 337 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 ZNF133P52736 654 aaPredicted RBP20.76■□□□□ 0.91
RAB40C-212ENST00000569575 CLRN1P58418 232 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 ADORA2A-AS1P86434 159 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 KRR1Q13601 381 aaKnown RBP20.76■□□□□ 0.91
RAB40C-212ENST00000569575 P2RY6Q15077 328 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 TTC23Q5W5X9 447 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 ANKRD34AQ69YU3 496 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 TFAP2EQ6VUC0 442 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 BTLAQ7Z6A9 289 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 IGFN1Q86VF2 1251 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 JAZF1Q86VZ6 243 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 GPR137CQ8N3F9 429 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 GALNT4Q8N4A0 578 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 ZNF555Q8NEP9 628 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 TMEM54Q969K7 222 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 Q96M85 177 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 ELOVL5Q9NYP7 299 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 UPB1Q9UBR1 384 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 IL20RAQ9UHF4 553 aa20.76■□□□□ 0.91
RAB40C-212ENST00000569575 RALYQ9UKM9 306 aaKnown RBP20.76■□□□□ 0.91
RAB40C-212ENST00000569575 PRSS37A4D1T9 235 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 H0YAE9 185 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 TRMUO75648 421 aaKnown RBP20.75■□□□□ 0.91
RAB40C-212ENST00000569575 RENP00797 406 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 ZNF3P17036 446 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 NTF4P34130 210 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 VHLP40337 213 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 CENPAP49450 140 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 SELENOPP49908 381 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 SH3BGRP55822 239 aaPredicted RBP20.75■□□□□ 0.91
RAB40C-212ENST00000569575 SIRPAP78324 504 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 TOP3AQ13472 1001 aaPredicted RBP20.75■□□□□ 0.91
RAB40C-212ENST00000569575 KEAP1Q14145 624 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 SNCBQ16143 134 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 FBXL19-AS1Q494R0 122 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 Q6ZT83 130 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 NOXO1Q8NFA2 376 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 OR6N1Q8NGY5 312 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 NRG4Q8WWG1 115 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 ZNF775Q96BV0 537 aaPredicted RBP20.75■□□□□ 0.91
RAB40C-212ENST00000569575 EMC6Q9BV81 110 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 HDHD5Q9BXW7 423 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 FN3KQ9H479 309 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 RIBC2Q9H4K1 309 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 ASB6Q9NWX5 421 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 GLTPQ9NZD2 209 aa20.75■□□□□ 0.91
RAB40C-212ENST00000569575 VSX1Q9NZR4 365 aaPredicted RBP20.75■□□□□ 0.91
RAB40C-212ENST00000569575 TEX13CA0A0J9YWL9 993 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 A8MXE2 369 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 E9PQ18 207 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 ARHGEF9O43307 516 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 KRT33AO76009 404 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 BMP5P22003 454 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 PAICSP22234 425 aaKnown RBP20.74■□□□□ 0.91
RAB40C-212ENST00000569575 CRABP1P29762 137 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 CDC42P60953 191 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 TGFBR3Q03167 851 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 VWA1Q6PCB0 445 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 DNM1P34Q6PK57 102 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 LSRQ86X29 649 aaPredicted RBP20.74■□□□□ 0.91
RAB40C-212ENST00000569575 DEPDC4Q8N2C3 294 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 OR4Q3Q8NH05 313 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 CA5BP1Q8WTZ4 195 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 PLEKHA8Q96JA3 519 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 TOR3AQ9H497 397 aa20.74■□□□□ 0.91
RAB40C-212ENST00000569575 ALPK2Q86TB3 2170 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 ZNF587BE7ETH6 402 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 MPZL2O60487 215 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 SNAP29O95721 258 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 IGFBP1P08833 259 aaPredicted RBP20.73■□□□□ 0.91
RAB40C-212ENST00000569575 IL18R1Q13478 541 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 CAMK2DQ13557 499 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 MELKQ14680 651 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 NRN1LQ496H8 165 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 MESTQ5EB52 335 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 C12orf73Q69YU5 71 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 SSX8Q7RTT4 187 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 DHRSXQ8N5I4 330 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 HDAC2Q92769 488 aaKnown RBP20.73■□□□□ 0.91
RAB40C-212ENST00000569575 BOD1Q96IK1 185 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 PITX2Q99697 317 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 C12orf49Q9H741 205 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 FAM118AQ9NWS6 357 aa20.73■□□□□ 0.91
RAB40C-212ENST00000569575 NDRG4Q9ULP0 352 aaKnown RBP20.73■□□□□ 0.91
RAB40C-212ENST00000569575 PCNX1Q96RV3 2341 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 DIDO1Q9BTC0 2240 aaKnown RBP20.72■□□□□ 0.91
RAB40C-212ENST00000569575 LOC100130705A0A1B0GUX0 176 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 SLC22A23A1A5C7 686 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 WIPF3A6NGB9 483 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 SURF4O15260 269 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 SMNDC1O75940 238 aaKnown RBP eCLIP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms