RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 C1orf21Q9H246 121 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 CXorf56Q9H5V9 222 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 STX18Q9P2W9 335 aaKnown RBP12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 CRNNQ9UBG3 495 aaPredicted RBP12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 POU2F3Q9UKI9 436 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 LAMP3Q9UQV4 416 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 V9GYQ6 96 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 ARFGEF3Q5TH69 2177 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 NPIPB13A6NJU9 1138 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 EFCAB9A8MZ26 197 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 CENPBD1B2RD01 187 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 NPIPB4C9JG80 1138 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 ARHGEF9O43307 516 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 IGHG1P01857 330 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 SEMG1P04279 462 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 PGA4P0DJD7 388 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 PGA3P0DJD8 388 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 CBR1P16152 277 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 DAP3P51398 398 aaKnown RBP12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 CDH11P55287 796 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 CLRN1P58418 232 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 TUBA1BP68363 451 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 TUBA4AP68366 448 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 ADAM8P78325 824 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 NKX6-1P78426 367 aaPredicted RBP12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 TAF11Q15544 211 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 C3orf36Q3SXR2 165 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 IQCCQ4KMZ1 466 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 SHEQ5VZ18 495 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 PODNL1Q6PEZ8 512 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 LRFN4Q6PJG9 635 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 ZNF813Q6ZN06 617 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 TMPRSS11FQ6ZWK6 438 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 TUBA1AQ71U36 451 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 TRPM8Q7Z2W7 1104 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 OAFQ86UD1 273 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 TGIF2LYQ8IUE0 185 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 FAM169BQ8N8A8 192 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 ASB10Q8WXI3 467 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 SLC38A2Q96QD8 506 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 FOXB1Q99853 325 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 TXNIPQ9H3M7 391 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 MUC13Q9H3R2 512 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 FAIMQ9NVQ4 179 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 ACTR3BQ9P1U1 418 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 TMEM5Q9Y2B1 443 aa12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 ZNF469Q96JG9 3925 aaPredicted RBP12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 TEP1Q99973 2627 aaKnown RBP12.05□□□□□ -0.48
HERPUD1-218ENST00000569569 IGHV1-18A0A0C4DH31 117 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 E7EQL1 145 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 TRMUO75648 421 aaKnown RBP12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 SEC14L2O76054 403 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 DIRAS1O95057 198 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 IGKV3-15P01624 115 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 SOD3P08294 240 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 QDPRP09417 244 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 PAX1P15863 534 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 ACADSP16219 412 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 ARR3P36575 388 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 CAPZA2P47755 286 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 SMIM11AP58511 58 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 CTXN1P60606 82 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 RPS4XP62701 263 aaKnown RBP12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 SPOCK1Q08629 439 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 TRIM25Q14258 630 aaKnown RBP12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 HIST3H3Q16695 136 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 PGGHGQ32M88 737 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 MTX3Q5HYI7 312 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 FGD3Q5JSP0 725 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 ARMC4Q5T2S8 1044 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 CYP2R1Q6VVX0 501 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 PIWIL3Q7Z3Z3 882 aaKnown RBP12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 MEX3DQ86XN8 651 aaKnown RBP12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 OR51A7Q8NH64 312 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 DHRS1Q96LJ7 313 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 TNFRSF13CQ96RJ3 184 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 DHRS9Q9BPW9 319 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 KCNS3Q9BQ31 491 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 MRPL13Q9BYD1 178 aaKnown RBP12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 GSX2Q9BZM3 304 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 IL1RAPQ9NPH3 570 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 TAS2R1Q9NYW7 299 aa12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 PRPF19Q9UMS4 504 aaKnown RBP12.04□□□□□ -0.48
HERPUD1-218ENST00000569569 TRAV27A0A087WT01 109 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 DHHO43323 396 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 ENTPD5O75356 428 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 IGLV1-44P01699 117 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 CRYAAP02489 173 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 FABP3P05413 133 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 B4GALT1P15291 398 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 GPR4P46093 362 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 PTH2RP49190 550 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 RUNX1T1Q06455 604 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 FHL1Q13642 323 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 ZBED5Q49AG3 693 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 PRSS57Q6UWY2 283 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 LRRC75AQ8NAA5 344 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 NOXO1Q8NFA2 376 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 OR52J3Q8NH60 311 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 NANOS1Q8WY41 292 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms