RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 TEX35Q5T0J7 233 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 DCST2Q5T1A1 773 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 C1QTNF12Q5T7M4 302 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 TUBA1AQ71U36 451 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 SPATA21Q7Z572 469 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 CDK20Q8IZL9 346 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 BPIFB2Q8N4F0 458 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 TEX29Q8N6K0 151 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 NUP37Q8NFH4 326 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 OR4F15Q8NGB8 312 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 FAM76AQ8TAV0 307 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 PIGXQ8TBF5 258 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 FBXO25Q8TCJ0 367 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 C22orf15Q8WYQ4 148 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 ST8SIA1Q92185 356 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 ZHX1-C8orf76Q96EF9 292 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 FAM120BQ96EK7 910 aaKnown RBP4.81□□□□□ -1.64
CDH13-211ENST00000568770 ARL5BQ96KC2 179 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 TMEM237Q96Q45 408 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 STACQ99469 402 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 C1QTNF5Q9BXJ0 243 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 OR11A1Q9GZK7 315 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 IQCGQ9H095 443 aaKnown RBP4.81□□□□□ -1.64
CDH13-211ENST00000568770 RACGAP1Q9H0H5 632 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 PIGUQ9H490 435 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 DYNLRB1Q9NP97 96 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 DDX28Q9NUL7 540 aaKnown RBP4.81□□□□□ -1.64
CDH13-211ENST00000568770 TREM2Q9NZC2 230 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 SLC9A8Q9Y2E8 581 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 WBP11Q9Y2W2 641 aaKnown RBP4.81□□□□□ -1.64
CDH13-211ENST00000568770 PPIAL4AQ9Y536 164 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 FLVCR1Q9Y5Y0 555 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 PTGDR2Q9Y5Y4 395 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 KCNE3Q9Y6H6 103 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 TANC2Q9HCD6 1990 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 NR5A2O00482 541 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 SEC22BO75396 215 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 JTBO76095 146 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 BCL10O95999 233 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 TFP02787 698 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 IMPDH1P20839 514 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 APOBEC1P41238 236 aaKnown RBP4.8□□□□□ -1.64
CDH13-211ENST00000568770 FRKP42685 505 aaPredicted RBP4.8□□□□□ -1.64
CDH13-211ENST00000568770 GPR6P46095 362 aaPredicted RBP4.8□□□□□ -1.64
CDH13-211ENST00000568770 ASMTP46597 345 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 PKNOX1P55347 436 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 OR2B6P58173 313 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 LMO4P61968 165 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 MYBPC1Q00872 1141 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 LCP2Q13094 533 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 SLC17A1Q14916 467 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 IMPG1Q17R60 797 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 TBRG1Q3YBR2 411 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 PDZK1Q5T2W1 519 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 CCDC144NLQ6NUI1 221 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 C1QL2Q7Z5L3 287 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 MYPOPQ86VE0 399 aaPredicted RBP4.8□□□□□ -1.64
CDH13-211ENST00000568770 OR1K1Q8NGR3 316 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 ADAMTS15Q8TE58 950 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 CKAP2Q8WWK9 683 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 TMEM234Q8WY98 164 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 PPCDCQ96CD2 204 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 ZG16BQ96DA0 208 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 AURKBQ96GD4 344 aaPredicted RBP4.8□□□□□ -1.64
CDH13-211ENST00000568770 ANKRD27Q96NW4 1050 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 CCDC106Q9BWC9 280 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 LAT2Q9GZY6 243 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 REEP4Q9H6H4 257 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 ZNF442Q9H7R0 627 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 PPCSQ9HAB8 311 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 NTN4Q9HB63 628 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 MID1IP1Q9NPA3 183 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 G6PC2Q9NQR9 355 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 CTPS2Q9NRF8 586 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 SIRT3Q9NTG7 399 aaPredicted RBP4.8□□□□□ -1.64
CDH13-211ENST00000568770 ACSS1Q9NUB1 689 aaPredicted RBP4.8□□□□□ -1.64
CDH13-211ENST00000568770 ZCCHC3Q9NUD5 404 aaKnown RBP4.8□□□□□ -1.64
CDH13-211ENST00000568770 ACER3Q9NUN7 267 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 TMEM45AQ9NWC5 275 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 CRNNQ9UBG3 495 aaPredicted RBP4.8□□□□□ -1.64
CDH13-211ENST00000568770 CHRNA9Q9UGM1 479 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 HDGFL3Q9Y3E1 203 aa4.8□□□□□ -1.64
CDH13-211ENST00000568770 DOCK11Q5JSL3 2073 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 ARPC4-TTLL3A0A0A6YYG9 625 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 A0A0G2JMP0 313 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 A0A0X1KG70 313 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 OR6C65A6NJZ3 312 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 TPD52L2O43399 206 aaKnown RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 PPIHO43447 177 aaKnown RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 RAD51CO43502 376 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 PLPP2O43688 288 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 PIP5K1CO60331 668 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 EIF1BO60739 113 aaKnown RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 TBX19O60806 448 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 KRT33AO76009 404 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 RSL1D1O76021 490 aaKnown RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 LGI1O95970 557 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 CSTAP01040 98 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 IGKV3-15P01624 115 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 IGLV1-44P01699 117 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms