RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	VCX	Q9H320	206 aa		13.17	□□□□□ -0.3
KLHDC4-223	ENST00000568499	SMURF2	Q9HAU4	748 aa		13.17	□□□□□ -0.3
KLHDC4-223	ENST00000568499	MALT1	Q9UDY8	824 aa		13.17	□□□□□ -0.3
KLHDC4-223	ENST00000568499	PRSS50	Q9UI38	385 aa		13.17	□□□□□ -0.3
KLHDC4-223	ENST00000568499	ADAM18	Q9Y3Q7	739 aa		13.17	□□□□□ -0.3
KLHDC4-223	ENST00000568499	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.17	□□□□□ -0.3
KLHDC4-223	ENST00000568499	KIAA1549	Q9HCM3	1950 aa		13.17	□□□□□ -0.3
KLHDC4-223	ENST00000568499	MED12L	Q86YW9	2145 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	UBR5	O95071	2799 aa	Predicted RBP	13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	TEX13C	A0A0J9YWL9	993 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	CIB4	A0PJX0	185 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499		M0R3G1	203 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	ARHGEF9	O43307	516 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	TRMU	O75648	421 aa	Known RBP	13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	TXNDC12	O95881	172 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	HMGN1	P05114	100 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	ZNF26	P17031	533 aa	Predicted RBP	13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	MPG	P29372	298 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	CD79B	P40259	229 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	GUCA1A	P43080	201 aa	Predicted RBP	13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	SH3BGR	P55822	239 aa	Predicted RBP	13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	FXYD6P3	P58550	94 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	PPP2R2B	Q00005	443 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	MYBPC1	Q00872	1141 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	SLC34A1	Q06495	639 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	CD47	Q08722	323 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	KRR1	Q13601	381 aa	Known RBP	13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	THEM4	Q5T1C6	240 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	CBR4	Q8N4T8	237 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	NOXO1	Q8NFA2	376 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	KISS1R	Q969F8	398 aa	Predicted RBP	13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499		Q96M85	177 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	SLC7A10	Q9NS82	523 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	TAS2R16	Q9NYV7	291 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	USE1	Q9NZ43	259 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	GLTP	Q9NZD2	209 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	REV1	Q9UBZ9	1251 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	KLHL21	Q9UJP4	597 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	GPR52	Q9Y2T5	361 aa		13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	RRP15	Q9Y3B9	282 aa	Known RBP	13.16	□□□□□ -0.3
KLHDC4-223	ENST00000568499	DIDO1	Q9BTC0	2240 aa	Known RBP	13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	C16orf97	H3BN30	126 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	SOCS2	O14508	198 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	EI24	O14681	340 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	UPK3A	O75631	287 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	REN	P00797	406 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	PGA4	P0DJD7	388 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	PGA3	P0DJD8	388 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	IL32	P24001	234 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	ZNF84	P51523	738 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	CRISP1	P54107	249 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	ROR2	Q01974	943 aa	Known RBP	13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.15	□□□□□ -0.3	9e-6	■□□□□ 8.7
KLHDC4-223	ENST00000568499	RIPK1	Q13546	671 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	STK11	Q15831	433 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	OR7E24	Q6IFN5	339 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	FAM122B	Q7Z309	247 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	GABRG1	Q8N1C3	465 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	LNX2	Q8N448	690 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	SYT14	Q8NB59	555 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	STEAP2	Q8NFT2	490 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	ZNF519	Q8TB69	540 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	TMEM54	Q969K7	222 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	PLA2G12A	Q9BZM1	189 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	RNPEPL1	Q9HAU8	725 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	SLC24A3	Q9HC58	644 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	GALNT8	Q9NY28	637 aa		13.15	□□□□□ -0.3
KLHDC4-223	ENST00000568499	PRSS37	A4D1T9	235 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	RIIAD1	A6NNX1	92 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	RPL36A-HNRNPH2	H7BZ11	118 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	BHLHE40	O14503	412 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	MGRN1	O60291	552 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ALPL	P05186	524 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	QDPR	P09417	244 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	PPP3CB	P16298	524 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ZNF3	P17036	446 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	PSMB1	P20618	241 aa	Known RBP	13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	HOXC12	P31275	282 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	GRK5	P34947	590 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	GIPR	P48546	466 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SORD	Q00796	357 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	GINS1	Q14691	196 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	PGGHG	Q32M88	737 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SFRP5	Q5T4F7	317 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	DNM1P34	Q6PK57	102 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SSX8	Q7RTT4	187 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	CXorf67	Q86X51	503 aa	Predicted RBP	13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	PACRGL	Q8N7B6	248 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	HDAC2	Q92769	488 aa	Known RBP	13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	RASD2	Q96D21	266 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	PLEKHA8	Q96JA3	519 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SLC38A2	Q96QD8	506 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SNX18	Q96RF0	628 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	KCNK17	Q96T54	332 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	MRPL13	Q9BYD1	178 aa	Known RBP	13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	VCX3B	Q9H321	246 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	RIBC2	Q9H4K1	309 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	CRLF2	Q9HC73	371 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms