RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 MT-ND5P03915 603 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 YES1P07947 543 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 SLC35E2P0CK97 266 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 LIMS3P0CW19 117 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 LIMS4P0CW20 117 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 SLC2A2P11168 524 aaPredicted RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 BTF3P20290 206 aaKnown RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 HLA-DMAP28067 261 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 GTF2E2P29084 291 aaKnown RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 PEBP1P30086 187 aaKnown RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 SLC6A6P31641 620 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 TGFBR1P36897 503 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ETV5P41161 510 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ACTR1BP42025 376 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 RABIFP47224 123 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ARRB1P49407 418 aaPredicted RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 INPP1P49441 399 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ETV1P50549 477 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 BLKP51451 505 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 PDX1P52945 283 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 RAB8AP61006 207 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ACTR1AP61163 376 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ACTA2P62736 377 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ACTG2P63267 376 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 EEF1A1P68104 462 aaKnown RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 HSF2Q03933 536 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 LGALS3BPQ08380 585 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 MRPL28Q13084 256 aaKnown RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 SELENBP1Q13228 472 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 KCNJ8Q15842 424 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ISXQ2M1V0 245 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ZFP69Q49AA0 526 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 HSD17B12Q53GQ0 312 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 DCST2Q5T1A1 773 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 GARNL3Q5VVW2 1013 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 RSBN1Q5VWQ0 802 aaPredicted RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 C18orf63Q68DL7 685 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 C22orf42Q6IC83 251 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ARHGAP11AQ6P4F7 1023 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF322Q6U7Q0 402 aaPredicted RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 PLET1Q6UQ28 207 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ENPP7Q6UWV6 458 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 BAIAP2L2Q6UXY1 529 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 RTL4Q6ZR62 310 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 RNF44Q7L0R7 432 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 MEPCEQ7L2J0 689 aaKnown RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF550Q7Z398 422 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 C1QL2Q7Z5L3 287 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 BCDIN3DQ7Z5W3 292 aaKnown RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 LRRC28Q86X40 367 aaPredicted RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 MARCH9Q86YJ5 346 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF440Q8IYI8 595 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 RDH10Q8IZV5 341 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 CLIP4Q8N3C7 705 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 DEFB119Q8N690 84 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 IQCF1Q8N6M8 205 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ARIH2OSQ8N7S6 290 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 COX18Q8N8Q8 333 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 AMER3Q8N944 861 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 TEX19Q8NA77 164 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 POMGNT2Q8NAT1 580 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF485Q8NCK3 441 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 OR4C6Q8NH72 309 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 GRPEL2Q8TAA5 225 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 NEIL3Q8TAT5 605 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 FANK1Q8TC84 345 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 GPR151Q8TDV0 419 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 TMEM239Q8WW34 195 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 TRIM63Q969Q1 353 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 C16orf58Q96GQ5 468 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 SNX22Q96L94 193 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 SDF2Q99470 211 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 SDHCQ99643 169 aaPredicted RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 KCNS3Q9BQ31 491 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 PELOQ9BRX2 385 aaKnown RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 KATNB1Q9BVA0 655 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 PLA2G12AQ9BZM1 189 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 SLC19A3Q9BZV2 496 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 TRIM2Q9C040 744 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 AICDAQ9GZX7 198 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 HOXD1Q9GZZ0 328 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 KLHL31Q9H511 634 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 XKR8Q9H6D3 395 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 FOLH1BQ9HBA9 442 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 NRIP3Q9NQ35 241 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 RPRD1BQ9NQG5 326 aaKnown RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 POLE4Q9NR33 117 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 CMC2Q9NRP2 79 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 RBFOX1Q9NWB1 397 aaKnown RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 BABAM2Q9NXR7 383 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 AKAP7Q9P0M2 348 aaPredicted RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 APOBEC3BQ9UH17 382 aaKnown RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 KLHL21Q9UJP4 597 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 PILRAQ9UKJ1 303 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 MRPS33Q9Y291 106 aaKnown RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 SLC35A3Q9Y2D2 325 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 A0A0G2JN53 185 aa4.78□□□□□ -1.64
CAPN3-217ENST00000567817 A0A0J9YY10 115 aa4.78□□□□□ -1.64
CAPN3-217ENST00000567817 A0A1B0GVT2 93 aa4.78□□□□□ -1.64
CAPN3-217ENST00000567817 A0A1W2PQ09 198 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms