RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 V9GYQ6 96 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 DYNC2H1Q8NCM8 4307 aaKnown RBP8.32□□□□□ -1.08
CAPN3-216ENST00000567071 DUXAA6NLW8 204 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 H0YHG0 523 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 ACOT8O14734 319 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 DHHO43323 396 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 GMNNO75496 209 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 H6PDO95479 791 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 AGR2O95994 175 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 OPN1SWP03999 348 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 TFPTP0C1Z6 253 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 PAX7P23759 505 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 EDNRAP25101 427 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 PSMA4P25789 261 aaKnown RBP8.31□□□□□ -1.08
CAPN3-216ENST00000567071 RAC3P60763 192 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 TXNL4AP83876 142 aaKnown RBP8.31□□□□□ -1.08
CAPN3-216ENST00000567071 CD69Q07108 199 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 RBBP4Q09028 425 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 KPNB1Q14974 876 aaKnown RBP8.31□□□□□ -1.08
CAPN3-216ENST00000567071 FXNQ16595 210 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 TMEM176BQ3YBM2 270 aaPredicted RBP8.31□□□□□ -1.08
CAPN3-216ENST00000567071 DCST2Q5T1A1 773 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 GLYATQ6IB77 296 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 LCN8Q6JVE9 175 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 REEP3Q6NUK4 255 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 ZAR1Q86SH2 424 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 SPATA24Q86W54 205 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 BCL6BQ8N143 479 aaPredicted RBP8.31□□□□□ -1.08
CAPN3-216ENST00000567071 LRGUKQ96M69 825 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 NSMCE2Q96MF7 247 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 SLC38A2Q96QD8 506 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 ZNF300Q96RE9 604 aaPredicted RBP8.31□□□□□ -1.08
CAPN3-216ENST00000567071 RTN4RQ9BZR6 473 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 TRIM15Q9C019 465 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 QRSL1Q9H0R6 528 aaKnown RBP8.31□□□□□ -1.08
CAPN3-216ENST00000567071 MUC13Q9H3R2 512 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 MS4A5Q9H3V2 200 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 DENND2DQ9H6A0 471 aaPredicted RBP8.31□□□□□ -1.08
CAPN3-216ENST00000567071 ZNF442Q9H7R0 627 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 Q9N2J8 555 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 DUSP22Q9NRW4 184 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 THUMPD1Q9NXG2 353 aaKnown RBP8.31□□□□□ -1.08
CAPN3-216ENST00000567071 GIN1Q9NXP7 522 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 ACTR3BQ9P1U1 418 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 MALT1Q9UDY8 824 aa8.31□□□□□ -1.08
CAPN3-216ENST00000567071 LCE2BO14633 110 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 CYTIPO60759 359 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 ENTPD5O75356 428 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 KCNK2O95069 426 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 ZNF682O95780 498 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 MPIG6BO95866 241 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 GPANK1O95872 356 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 SERPINA1P01009 418 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 IGKV1D-16P01601 117 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 RNF144AP50876 292 aaPredicted RBP8.3□□□□□ -1.08
CAPN3-216ENST00000567071 CRISP3P54108 245 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 KRTAP10-3P60369 221 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 POU3F1Q03052 451 aaPredicted RBP8.3□□□□□ -1.08
CAPN3-216ENST00000567071 TRAP1Q12931 704 aaKnown RBP8.3□□□□□ -1.08
CAPN3-216ENST00000567071 GPR68Q15743 365 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 ARHGAP11BQ3KRB8 267 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 ELFN2Q5R3F8 820 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 INTS11Q5TA45 600 aaKnown RBP8.3□□□□□ -1.08
CAPN3-216ENST00000567071 C9orf135Q5VTT2 229 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 TYW3Q6IPR3 259 aaKnown RBP8.3□□□□□ -1.08
CAPN3-216ENST00000567071 FRRS1Q6ZNA5 592 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 SLC30A8Q8IWU4 369 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 NUP37Q8NFH4 326 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 BBS10Q8TAM1 723 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 TAMM41Q96BW9 452 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 RSRC1Q96IZ7 334 aaKnown RBP8.3□□□□□ -1.08
CAPN3-216ENST00000567071 TRNT1Q96Q11 434 aaKnown RBP8.3□□□□□ -1.08
CAPN3-216ENST00000567071 SDF2Q99470 211 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 SLC38A1Q9H2H9 487 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 FLRT3Q9NZU0 649 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 UPB1Q9UBR1 384 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 MKLN1Q9UL63 735 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 ICAM5Q9UMF0 924 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 WDR45Q9Y484 360 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 PCDHGB5Q9Y5G0 923 aa8.3□□□□□ -1.08
CAPN3-216ENST00000567071 IGHV1-18A0A0C4DH31 117 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 CENPVL1A0A0U1RR11 272 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 TTC36A6NLP5 189 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 M0R233 179 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 GPR171O14626 319 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 SYNGR3O43761 229 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 FCMRO60667 390 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 MRPL33O75394 65 aaKnown RBP8.29□□□□□ -1.08
CAPN3-216ENST00000567071 STX11O75558 287 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 CLPXO76031 633 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 UTS2O95399 124 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 PPP1R3DO95685 299 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 AK1P00568 194 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 ITGA5P08648 1049 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 FAM157BP0CG42 384 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 CDH2P19022 906 aaPredicted RBP8.29□□□□□ -1.08
CAPN3-216ENST00000567071 ATP6V1C1P21283 382 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 COL8A2P25067 703 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 SHC1P29353 583 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 KDELR2P33947 212 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms