RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 CARD18P57730 90 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 RPS3AP61247 264 aaKnown RBP11.17□□□□□ -0.62
CFDP1-207ENST00000566901 POU3F1Q03052 451 aaPredicted RBP11.17□□□□□ -0.62
CFDP1-207ENST00000566901 ST3GAL4Q11206 333 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 IRF3Q14653 427 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 RNFT1Q5M7Z0 435 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 LEG1Q6P5S2 330 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 SLC35D2Q76EJ3 337 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 BCDIN3DQ7Z5W3 292 aaKnown RBP11.17□□□□□ -0.62
CFDP1-207ENST00000566901 RBMXL3Q8N7X1 1067 aaKnown RBP11.17□□□□□ -0.62
CFDP1-207ENST00000566901 POMGNT2Q8NAT1 580 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 BBS1Q8NFJ9 593 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 OR2T4Q8NH00 348 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 OR10D3Q8NH80 312 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 FNDC8Q8TC99 324 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 KISS1RQ969F8 398 aaPredicted RBP11.17□□□□□ -0.62
CFDP1-207ENST00000566901 ABTB1Q969K4 478 aaPredicted RBP11.17□□□□□ -0.62
CFDP1-207ENST00000566901 LGALS12Q96DT0 336 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 RNFT2Q96EX2 444 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 TMEM80Q96HE8 168 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 NMNAT3Q96T66 252 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 TUBA1CQ9BQE3 449 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 RHNO1Q9BSD3 238 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 AMBNQ9NP70 447 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 ZNF71Q9NQZ8 489 aaPredicted RBP11.17□□□□□ -0.62
CFDP1-207ENST00000566901 KLHL13Q9P2N7 655 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 ERVK-18Q9QC07 812 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 B3GNT3Q9Y2A9 372 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 FKBP7Q9Y680 259 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 ICE1Q9Y2F5 2266 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 BSNQ9UPA5 3926 aa11.17□□□□□ -0.62
CFDP1-207ENST00000566901 KIAA1549Q9HCM3 1950 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 USP9YO00507 2555 aaPredicted RBP11.16□□□□□ -0.62
CFDP1-207ENST00000566901 OR6C68A6NDL8 312 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 FAM183AA6NL82 134 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 ZNF814B7Z6K7 855 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 AQP7O14520 342 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 SMAD9O15198 467 aaKnown RBP11.16□□□□□ -0.62
CFDP1-207ENST00000566901 AKAP8O43823 692 aaKnown RBP11.16□□□□□ -0.62
CFDP1-207ENST00000566901 GLCEO94923 617 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 RAB36O95755 333 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 IGHA1P01876 353 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 PDGFAP04085 211 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 IFNGR1P15260 489 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 ZNF43P17038 809 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 SPI1P17947 270 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 PCMT1P22061 227 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 TTKP33981 857 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 ACVR1BP36896 505 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 BLVRAP53004 296 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 CLDN15P56746 228 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 EEF1A1P5Q5VTE0 462 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 TMEM225Q6GV28 225 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 DNM1P34Q6PK57 102 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 B3GNT6Q6ZMB0 384 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 KCTD8Q6ZWB6 473 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 ZBTB46Q86UZ6 589 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 SIAH3Q8IW03 269 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 CYB561A3Q8NBI2 242 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 OR52I1Q8NGK6 324 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 OR6X1Q8NH79 312 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 SGCDQ92629 289 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 DNAJA3Q96EY1 480 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 TEAD3Q99594 435 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 HCAR1Q9BXC0 346 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 SRXN1Q9BYN0 137 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 RACGAP1Q9H0H5 632 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 TSPAN10Q9H1Z9 355 aaPredicted RBP11.16□□□□□ -0.62
CFDP1-207ENST00000566901 INPP5EQ9NRR6 644 aa11.16□□□□□ -0.62
CFDP1-207ENST00000566901 EXOSC1Q9Y3B2 195 aaKnown RBP11.16□□□□□ -0.62
CFDP1-207ENST00000566901 IGKV3D-15A0A087WSY6 115 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 SLC22A23A1A5C7 686 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 J3QRE1 110 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 CXCL13O43927 109 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 CYTIPO60759 359 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 PLGP00747 810 aaPredicted RBP11.15□□□□□ -0.62
CFDP1-207ENST00000566901 CRYABP02511 175 aaKnown RBP11.15□□□□□ -0.62
CFDP1-207ENST00000566901 OPN1LWP04000 364 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 STSP08842 583 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 HLA-DOBP13765 273 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 CRABP1P29762 137 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 GSTT1P30711 240 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 SUCLG1P53597 346 aaKnown RBP11.15□□□□□ -0.62
CFDP1-207ENST00000566901 ACTC1P68032 377 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 ACTA1P68133 377 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 SRSF1Q07955 248 aaKnown RBP eCLIP11.15□□□□□ -0.629e-8■□□□□ 10
CFDP1-207ENST00000566901 C1DQ13901 141 aaKnown RBP11.15□□□□□ -0.62
CFDP1-207ENST00000566901 SLC17A1Q14916 467 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 PON3Q15166 354 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 KLHL12Q53G59 568 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 UBE2UQ5VVX9 321 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 XAF1Q6GPH4 301 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 OR9K2Q8NGE7 335 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 ZPLD1Q8TCW7 415 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 MUL1Q969V5 352 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 ABHD17AQ96GS6 310 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 SLC25A44Q96H78 314 aaPredicted RBP11.15□□□□□ -0.62
CFDP1-207ENST00000566901 MRPL13Q9BYD1 178 aaKnown RBP11.15□□□□□ -0.62
CFDP1-207ENST00000566901 CCDC90BQ9GZT6 254 aa11.15□□□□□ -0.62
CFDP1-207ENST00000566901 PRDM14Q9GZV8 571 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms