RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 SYNGR4O95473 234 aa27.24■■□□□ 1.95
CTCF-203ENST00000566078 CRYABP02511 175 aaKnown RBP27.24■■□□□ 1.95
CTCF-203ENST00000566078 GSTT1P30711 240 aa27.24■■□□□ 1.95
CTCF-203ENST00000566078 CLDN17P56750 224 aa27.24■■□□□ 1.95
CTCF-203ENST00000566078 TMED1Q13445 227 aa27.24■■□□□ 1.95
CTCF-203ENST00000566078 LCN1P1Q5VSP4 162 aa27.24■■□□□ 1.95
CTCF-203ENST00000566078 KCTD8Q6ZWB6 473 aa27.24■■□□□ 1.95
CTCF-203ENST00000566078 CREB3L2Q70SY1 520 aa27.24■■□□□ 1.95
CTCF-203ENST00000566078 SHFQ7M4L6 423 aa27.24■■□□□ 1.95
CTCF-203ENST00000566078 HDDC2Q7Z4H3 204 aa27.24■■□□□ 1.95
CTCF-203ENST00000566078 TMEM80Q96HE8 168 aa27.24■■□□□ 1.95
CTCF-203ENST00000566078 TUBD1Q9UJT1 453 aa27.24■■□□□ 1.95
CTCF-203ENST00000566078 COMMD3-BMI1R4GMX3 469 aa27.24■■□□□ 1.95
CTCF-203ENST00000566078 DSPP15924 2871 aaKnown RBP27.23■■□□□ 1.95
CTCF-203ENST00000566078 SLC22A23A1A5C7 686 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 TRMUO75648 421 aaKnown RBP27.23■■□□□ 1.95
CTCF-203ENST00000566078 FADS2O95864 444 aaKnown RBP27.23■■□□□ 1.95
CTCF-203ENST00000566078 ADRA2AP08913 450 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 SLC35D3Q5M8T2 416 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 SYT14Q8NB59 555 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 OR51G2Q8NGK0 314 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 ZNRF4Q8WWF5 429 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 KCNK17Q96T54 332 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 SRA1Q9HD15 236 aaKnown RBP27.23■■□□□ 1.95
CTCF-203ENST00000566078 PLSCR2Q9NRY7 297 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 MCTS1Q9ULC4 181 aaKnown RBP27.23■■□□□ 1.95
CTCF-203ENST00000566078 SLC35F4A4IF30 521 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 CYTIPO60759 359 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 RAB36O95755 333 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 PYCR1P32322 319 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 PON3Q15166 354 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 CHMP1BQ7LBR1 199 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 KDF1Q8NAX2 398 aaPredicted RBP27.23■■□□□ 1.95
CTCF-203ENST00000566078 PROKR2Q8NFJ6 384 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 OR2T4Q8NH00 348 aa27.23■■□□□ 1.95
CTCF-203ENST00000566078 ZMYND19Q96E35 227 aaPredicted RBP27.23■■□□□ 1.95
CTCF-203ENST00000566078 ZZEF1O43149 2961 aa27.22■■□□□ 1.95
CTCF-203ENST00000566078 ZNF716A6NP11 495 aa27.22■■□□□ 1.95
CTCF-203ENST00000566078 DCTN6O00399 190 aa27.22■■□□□ 1.95
CTCF-203ENST00000566078 ATP6V1E1P36543 226 aa27.22■■□□□ 1.95
CTCF-203ENST00000566078 CAMK2DQ13557 499 aa27.22■■□□□ 1.95
CTCF-203ENST00000566078 OR6V1Q8N148 313 aa27.22■■□□□ 1.95
CTCF-203ENST00000566078 SVOPQ8N4V2 548 aa27.22■■□□□ 1.95
CTCF-203ENST00000566078 OR4F15Q8NGB8 312 aa27.22■■□□□ 1.95
CTCF-203ENST00000566078 OR6K6Q8NGW6 343 aa27.22■■□□□ 1.95
CTCF-203ENST00000566078 OR6X1Q8NH79 312 aa27.22■■□□□ 1.95
CTCF-203ENST00000566078 ADAD1Q96M93 576 aaKnown RBP27.22■■□□□ 1.95
CTCF-203ENST00000566078 NUAK2Q9H093 628 aa27.22■■□□□ 1.95
CTCF-203ENST00000566078 RERGLQ9H628 205 aa27.22■■□□□ 1.95
CTCF-203ENST00000566078 FAM171A2A8MVW0 826 aa27.21■■□□□ 1.95
CTCF-203ENST00000566078 GLCEO94923 617 aa27.21■■□□□ 1.95
CTCF-203ENST00000566078 TFAP2AP05549 437 aa27.21■■□□□ 1.95
CTCF-203ENST00000566078 MAP2K4P45985 399 aa27.21■■□□□ 1.95
CTCF-203ENST00000566078 RASGEF1BQ0VAM2 473 aa27.21■■□□□ 1.95
CTCF-203ENST00000566078 NEDD8Q15843 81 aa27.21■■□□□ 1.95
CTCF-203ENST00000566078 FAM180AQ6UWF9 173 aa27.21■■□□□ 1.95
CTCF-203ENST00000566078 PLXDC2Q6UX71 529 aa27.21■■□□□ 1.95
CTCF-203ENST00000566078 NOXO1Q8NFA2 376 aa27.21■■□□□ 1.95
CTCF-203ENST00000566078 SLC25A44Q96H78 314 aaPredicted RBP27.21■■□□□ 1.95
CTCF-203ENST00000566078 ZNF385AQ96PM9 386 aaKnown RBP27.21■■□□□ 1.95
CTCF-203ENST00000566078 PRDM14Q9GZV8 571 aa27.21■■□□□ 1.95
CTCF-203ENST00000566078 VCX3AQ9NNX9 186 aa27.21■■□□□ 1.95
CTCF-203ENST00000566078 FGF20Q9NP95 211 aaPredicted RBP27.21■■□□□ 1.95
CTCF-203ENST00000566078 TAS2R16Q9NYV7 291 aa27.21■■□□□ 1.95
CTCF-203ENST00000566078 EXOGQ9Y2C4 368 aaKnown RBP27.21■■□□□ 1.95
CTCF-203ENST00000566078 ZNF726A6NNF4 738 aa27.2■■□□□ 1.95
CTCF-203ENST00000566078 IGHG1P01857 330 aa27.2■■□□□ 1.95
CTCF-203ENST00000566078 MRPL3P09001 348 aaKnown RBP27.2■■□□□ 1.95
CTCF-203ENST00000566078 NR1H2P55055 460 aa27.2■■□□□ 1.95
CTCF-203ENST00000566078 CLRN1P58418 232 aa27.2■■□□□ 1.95
CTCF-203ENST00000566078 B3GNT6Q6ZMB0 384 aa27.2■■□□□ 1.95
CTCF-203ENST00000566078 ABHD3Q8WU67 409 aa27.2■■□□□ 1.95
CTCF-203ENST00000566078 TUBA1CQ9BQE3 449 aa27.2■■□□□ 1.95
CTCF-203ENST00000566078 ALG12Q9BV10 488 aa27.2■■□□□ 1.95
CTCF-203ENST00000566078 PRORYQ9H606 182 aa27.2■■□□□ 1.95
CTCF-203ENST00000566078 HAO2Q9NYQ3 351 aa27.2■■□□□ 1.95
CTCF-203ENST00000566078 DIMT1Q9UNQ2 313 aaKnown RBP27.2■■□□□ 1.95
CTCF-203ENST00000566078 MOKQ9UQ07 419 aa27.2■■□□□ 1.95
CTCF-203ENST00000566078 FKBP7Q9Y680 259 aa27.2■■□□□ 1.95
CTCF-203ENST00000566078 SVILO95425 2214 aa27.2■■□□□ 1.94
CTCF-203ENST00000566078 GTF3C1Q12789 2109 aa27.2■■□□□ 1.94
CTCF-203ENST00000566078 A0A1B0GTH9 108 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 SLC16A7O60669 478 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 PGA4P0DJD7 388 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 PGA3P0DJD8 388 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 PCMT1P22061 227 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 EMX1Q04741 257 aaPredicted RBP27.19■■□□□ 1.94
CTCF-203ENST00000566078 CARD17Q5XLA6 110 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 Q8NA96 180 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 FNDC9Q8TBE3 224 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 RNF128Q8TEB7 428 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 SARAFQ96BY9 339 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 PRRG4Q9BZD6 226 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 ADGRL4Q9HBW9 690 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 FLVCR1Q9Y5Y0 555 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 ZNHIT1O43257 154 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 CTLA4P16410 223 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 FMODQ06828 376 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 GGTLC2Q14390 218 aa27.19■■□□□ 1.94
CTCF-203ENST00000566078 LINC01590Q5TEZ4 76 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms