RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ZDHHC16Q969W1 377 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 GAL3ST1Q99999 423 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 HOPXQ9BPY8 73 aaPredicted RBP7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 MRI1Q9BV20 369 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 SF3B5Q9BWJ5 86 aaKnown RBP7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 NOX3Q9HBY0 568 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 CALML5Q9NZT1 146 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 ASH2LQ9UBL3 628 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 DUSP13Q9UII6 198 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 PURGQ9UJV8 347 aaKnown RBP7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 WIPI2Q9Y4P8 454 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 TRBV5-3A0A0A0MS03 114 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 IGHV1-69-2A0A0G2JMI3 117 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 AGAP5A6NIR3 686 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 CLDN25C9JDP6 229 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 HOXA3O43365 443 aaPredicted RBP7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 CLPXO76031 633 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 NAT2P11245 290 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 BMP2P12643 396 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 HOXB9P17482 250 aaPredicted RBP7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 CDKN2CP42773 168 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 KRTAP10-3P60369 221 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 SF3A3Q12874 501 aaKnown RBP eCLIP7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 NPRL3Q12980 569 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 KRT72Q14CN4 511 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 RGNQ15493 299 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 HFEQ30201 348 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 TRMT5Q32P41 509 aaKnown RBP7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 RUNDC3AQ59EK9 446 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 SAMD5Q5TGI4 173 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 PRAMEF8Q5VWM4 474 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 PRAMEF7Q5VXH5 474 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 TMEM225Q6GV28 225 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 SLC2A7Q6PXP3 512 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 PAQR6Q6TCH4 344 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 FIP1L1Q6UN15 594 aaKnown RBP7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 HACD2Q6Y1H2 254 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 ARPINQ7Z6K5 226 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 ZIC4Q8N9L1 334 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 DEFB108BQ8NET1 73 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 OR9K2Q8NGE7 335 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 OR52E2Q8NGJ4 325 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 OR5AK3PQ8NH89 298 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 ZNF563Q8TA94 476 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 XAGE5Q8WWM1 108 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 CDS1Q92903 461 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 DDIT4LQ96D03 193 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 DNAJA3Q96EY1 480 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 WWC2-AS2Q96NR7 200 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 TRNT1Q96Q11 434 aaKnown RBP7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 OR7D2Q96RA2 312 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 SDF2Q99470 211 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 CGREF1Q99674 301 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 SPATA9Q9BWV2 254 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 OR51I1Q9H343 314 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 MTHFD2LQ9H903 347 aaPredicted RBP7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 CTPS2Q9NRF8 586 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 DECR2Q9NUI1 292 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 NDE1Q9NXR1 346 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 NKIRAS2Q9NYR9 191 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 C1RLQ9NZP8 487 aa7.69□□□□□ -1.18
VPS9D1-205ENST00000565452 A0A1W2PPW3 197 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 TMEM229AB2RXF0 380 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 FBP2O00757 339 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 MRASO14807 208 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 DHHO43323 396 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 TPD52L2O43399 206 aaKnown RBP7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 STX11O75558 287 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 NCR1O76036 304 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 ZNF432O94892 652 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 CSTAP01040 98 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 CRATP43155 626 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 MAGEB1P43366 347 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 HTR3AP46098 478 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 CCL8P80075 99 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 GALK2Q01415 458 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 RBBP4Q09028 425 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 NFYCQ13952 458 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 DOC2BQ14184 412 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 MAD2L1BPQ15013 274 aaPredicted RBP7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 NKPD1Q17RQ9 610 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 LRRC74BQ6ZQY2 392 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 C9orf139Q6ZV77 190 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 EIF3MQ7L2H7 374 aaKnown RBP7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 C16orf62Q7Z3J2 963 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 GRINAQ7Z429 371 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 DHDDSQ86SQ9 333 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 LRP11Q86VZ4 500 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 SNX32Q86XE0 403 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 RNF130Q86XS8 419 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 SLC30A8Q8IWU4 369 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 ANKK1Q8NFD2 765 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 OR8J3Q8NGG0 315 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 OTUB1Q96FW1 271 aaPredicted RBP7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 NSL1Q96IY1 281 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 ZNF385AQ96PM9 386 aaKnown RBP7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 KRTAP17-1Q9BYP8 105 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 OR11A1Q9GZK7 315 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 TMEM38AQ9H6F2 299 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms