RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ZNF813Q6ZN06 617 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 USP51Q70EK9 711 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 JAZF1Q86VZ6 243 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 C1QL4Q86Z23 238 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 SKA3Q8IX90 412 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 GPR137CQ8N3F9 429 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 CADM2Q8N3J6 435 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 TEX29Q8N6K0 151 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 TESCQ96BS2 214 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 RAB39BQ96DA2 213 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 SLC41A3Q96GZ6 507 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 OXGR1Q96P68 337 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 C20orf27Q9GZN8 174 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 ZMAT3Q9HA38 289 aaKnown RBP8.76□□□□□ -1.01
SF3B3-204ENST00000563739 NPHS2Q9NP85 383 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 TCF7L2Q9NQB0 619 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 HINT3Q9NQE9 182 aaKnown RBP8.76□□□□□ -1.01
SF3B3-204ENST00000563739 PLEK2Q9NYT0 353 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 KLHL14Q9P2G3 628 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 SLC7A8Q9UHI5 535 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 DUSP13Q9UII6 198 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 HAO1Q9UJM8 370 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 ZNF443Q9Y2A4 671 aaPredicted RBP8.76□□□□□ -1.01
SF3B3-204ENST00000563739 POLR3KQ9Y2Y1 108 aaPredicted RBP8.76□□□□□ -1.01
SF3B3-204ENST00000563739 RAP2CQ9Y3L5 183 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 PRSS51A0A1B0GVH4 220 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 A0A1W2PPW3 197 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 ZSCAN5BA6NJL1 495 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 F5H0A9 414 aaPredicted RBP8.75□□□□□ -1.01
SF3B3-204ENST00000563739 AHSA1O95433 338 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 IGHV2-70P01814 119 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 DBIP07108 87 aaKnown RBP8.75□□□□□ -1.01
SF3B3-204ENST00000563739 ALDOCP09972 364 aaKnown RBP8.75□□□□□ -1.01
SF3B3-204ENST00000563739 FAM157BP0CG42 384 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 CCL2P13500 99 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 ZNF43P17038 809 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 GATA3P23771 443 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 MDH1P40925 334 aaKnown RBP8.75□□□□□ -1.01
SF3B3-204ENST00000563739 CAPZA2P47755 286 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 MMP15P51511 669 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 RAB1AP62820 205 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 GNGT1P63211 74 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 CARD17Q5XLA6 110 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 ATG16L1Q676U5 607 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 ASPHD2Q6ICH7 369 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 C9orf139Q6ZV77 190 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 CCDC36Q8IYA8 594 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 KIRREL3Q8IZU9 778 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 ADPRHL1Q8NDY3 354 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 PIK3C3Q8NEB9 887 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 PNPT1Q8TCS8 783 aaKnown RBP8.75□□□□□ -1.01
SF3B3-204ENST00000563739 POP5Q969H6 163 aaKnown RBP8.75□□□□□ -1.01
SF3B3-204ENST00000563739 SLC25A36Q96CQ1 311 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 TUBGCP3Q96CW5 907 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 FOXB1Q99853 325 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 AKTIPQ9H8T0 292 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 PURGQ9UJV8 347 aaKnown RBP8.75□□□□□ -1.01
SF3B3-204ENST00000563739 NUP50Q9UKX7 468 aa8.75□□□□□ -1.01
SF3B3-204ENST00000563739 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.75□□□□□ -1.01
SF3B3-204ENST00000563739 DYNC2H1Q8NCM8 4307 aaKnown RBP8.75□□□□□ -1.01
SF3B3-204ENST00000563739 VSTM5A8MXK1 200 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 A8MXK9 166 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 CLDN25C9JDP6 229 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 LRRN3E7EW58 273 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 MFN2O95140 757 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 TSPAN15O95858 294 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 PLATP00750 562 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 IGHV1-46P01743 117 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 BGLAPP02818 100 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 ANPEPP15144 967 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 IL7RP16871 459 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 CBLP22681 906 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 MPV17P39210 176 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 RPL14P50914 215 aaKnown RBP8.74□□□□□ -1.01
SF3B3-204ENST00000563739 RPS23P62266 143 aaKnown RBP8.74□□□□□ -1.01
SF3B3-204ENST00000563739 HPCAP84074 193 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 GLO1Q04760 184 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 BAMBIQ13145 260 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 NKPD1Q17RQ9 610 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 TRMT5Q32P41 509 aaKnown RBP8.74□□□□□ -1.01
SF3B3-204ENST00000563739 GTDC1Q4AE62 458 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 RGS7BPQ6MZT1 257 aaPredicted RBP8.74□□□□□ -1.01
SF3B3-204ENST00000563739 ZNF440Q8IYI8 595 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 OR52P1PQ8NH57 321 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 TMIGD2Q96BF3 282 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 LRR1Q96L50 414 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 MOGAT1Q96PD6 335 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 WFDC6Q9BQY6 131 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 OR51B6Q9H340 312 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 MTHFD2LQ9H903 347 aaPredicted RBP8.74□□□□□ -1.01
SF3B3-204ENST00000563739 THAP1Q9NVV9 213 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 NOP53Q9NZM5 478 aaKnown RBP8.74□□□□□ -1.01
SF3B3-204ENST00000563739 BTNL2Q9UIR0 455 aa8.74□□□□□ -1.01
SF3B3-204ENST00000563739 ZNF346Q9UL40 294 aaKnown RBP8.74□□□□□ -1.01
SF3B3-204ENST00000563739 IGHV3OR16-10A0A075B7F0 116 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 A0A096LPI6 279 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 AIM2O14862 343 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 SERPINA5P05154 406 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 ETFAP13804 333 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 FPR2P25090 351 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms