RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 POMPQ9Y244 141 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 SIGLEC7Q9Y286 467 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 LYVE1Q9Y5Y7 322 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 CCDC168Q8NDH2 2452 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 AKAP6Q13023 2319 aa7.47□□□□□ -1.21
UBR1-204ENST00000563239 ARPC4-TTLL3A0A0A6YYG9 625 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 IGKV1D-43A0A0B4J1Z2 117 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 A0A1W2PRG6 482 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 AQP12BA6NM10 295 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 ZNF99A8MXY4 864 aaPredicted RBP7.46□□□□□ -1.22
UBR1-204ENST00000563239 SHISA9B4DS77 424 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 MCIDASD6RGH6 385 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 TRMUO75648 421 aaKnown RBP7.46□□□□□ -1.22
UBR1-204ENST00000563239 SEC14L2O76054 403 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 GADD45GO95257 159 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 BCL10O95999 233 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 SAGP10523 405 aaPredicted RBP7.46□□□□□ -1.22
UBR1-204ENST00000563239 HOXB1P14653 301 aaPredicted RBP7.46□□□□□ -1.22
UBR1-204ENST00000563239 CD53P19397 219 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 CSNK1A1P48729 337 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 ZNF83P51522 516 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 ZNF133P52736 654 aaPredicted RBP7.46□□□□□ -1.22
UBR1-204ENST00000563239 IST1P53990 364 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 NR1H2P55055 460 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 SH3BGRP55822 239 aaPredicted RBP7.46□□□□□ -1.22
UBR1-204ENST00000563239 SMIM11AP58511 58 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 TUBA1BP68363 451 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 TUBA4AP68366 448 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 SPOCK1Q08629 439 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 PPP1R8Q12972 351 aaKnown RBP7.46□□□□□ -1.22
UBR1-204ENST00000563239 TESK1Q15569 626 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 ANKDD1AQ495B1 522 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 ZBED5Q49AG3 693 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 FBXW10Q5XX13 1052 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 ZNF770Q6IQ21 691 aaPredicted RBP7.46□□□□□ -1.22
UBR1-204ENST00000563239 ADAM5Q6NVV9 412 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 PAMR1Q6UXH9 720 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 THSD4Q6ZMP0 1018 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 ZNF704Q6ZNC4 412 aaPredicted RBP7.46□□□□□ -1.22
UBR1-204ENST00000563239 TUBA1AQ71U36 451 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 SSX8Q7RTT4 187 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 FAM122BQ7Z309 247 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 AQP12AQ8IXF9 295 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 CLDN22Q8N7P3 220 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 OR6N1Q8NGY5 312 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 ZNF519Q8TB69 540 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 CANT1Q8WVQ1 401 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 HDAC2Q92769 488 aaKnown RBP7.46□□□□□ -1.22
UBR1-204ENST00000563239 MCHR2Q969V1 340 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 ZNF566Q969W8 418 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 SLCO4A1Q96BD0 722 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 MUCL1Q96DR8 90 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 ALPK1Q96QP1 1244 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 TSPAN32Q96QS1 320 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 KCNK17Q96T54 332 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 TMUB1Q9BVT8 246 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 ULBP2Q9BZM5 246 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 TXNIPQ9H3M7 391 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 NOX3Q9HBY0 568 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 B3GNT2Q9NY97 397 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 ZNF224Q9NZL3 707 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 CRNNQ9UBG3 495 aaPredicted RBP7.46□□□□□ -1.22
UBR1-204ENST00000563239 TMEM5Q9Y2B1 443 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 PLEKHA6Q9Y2H5 1048 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 AMDHD2Q9Y303 409 aa7.46□□□□□ -1.22
UBR1-204ENST00000563239 VPS13CQ709C8 3753 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 ROS1P08922 2347 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 IGHV1-18A0A0C4DH31 117 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 TCRBV3S1A0A5B6 114 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 UNC119BA6NIH7 251 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 CENPBD1B2RD01 187 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 KRT36O76013 467 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 IGLV1-44P01699 117 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 IGHG1P01857 330 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 QDPRP09417 244 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 RAP2AP10114 183 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 ACADSP16219 412 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 CD40P25942 277 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 GSSP48637 474 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 DAP3P51398 398 aaKnown RBP7.45□□□□□ -1.22
UBR1-204ENST00000563239 PRSS12P56730 875 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 CTXN1P60606 82 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 PRPS1P60891 318 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 RPL27P61353 136 aaKnown RBP7.45□□□□□ -1.22
UBR1-204ENST00000563239 ERVK-25P63136 954 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 MYBPC1Q00872 1141 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 CHRNB3Q05901 458 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 TAF11Q15544 211 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 KRTAP21-3Q3LHN1 58 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 C1QTNF12Q5T7M4 302 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 C1orf94Q6P1W5 598 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 PGBD2Q6P3X8 592 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 RRM2BQ7LG56 351 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 MYPOPQ86VE0 399 aaPredicted RBP7.45□□□□□ -1.22
UBR1-204ENST00000563239 CDK20Q8IZL9 346 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 SYT14Q8NB59 555 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 NOXO1Q8NFA2 376 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 KBTBD8Q8NFY9 601 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 FGFBP3Q8TAT2 258 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 HTRA1Q92743 480 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms