RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 NPIPA7E9PJI5 369 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 KLRC4-KLRK1H3BQV0 150 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 TP53I11O14683 189 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 MRASO14807 208 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 CCDC22O60826 627 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 REM1O75628 298 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 KRT34O76011 436 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 UTS2O95399 124 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 KRT75O95678 551 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 LDLRP01130 860 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 IGHG3P01860 377 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 P04436 131 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 HPNP05981 417 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 KRT16P08779 473 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 NPIPA8P0DM63 369 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 PSMA4P25789 261 aaKnown RBP4.04□□□□□ -1.76
SMG1-206ENST00000562668 PRDX6P30041 224 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 LCN1P31025 176 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 EVI2BP34910 448 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 TIMP3P35625 211 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 CPOXP36551 454 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 CDKN1AP38936 164 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 DCTP40126 519 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 RFC3P40938 356 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 MAGEA5P43359 124 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 TMED10P49755 219 aaKnown RBP4.04□□□□□ -1.76
SMG1-206ENST00000562668 KHKP50053 298 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 ATP12AP54707 1039 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 MTPNP58546 118 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 B3GALT5-AS1P59052 145 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 DSTNP60981 165 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 RELQ04864 619 aaPredicted RBP4.04□□□□□ -1.76
SMG1-206ENST00000562668 FADDQ13158 208 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 CAPRIN1Q14444 709 aaKnown RBP4.04□□□□□ -1.76
SMG1-206ENST00000562668 ZNHIT3Q15649 155 aaPredicted RBP4.04□□□□□ -1.76
SMG1-206ENST00000562668 DECR1Q16698 335 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 TRMT5Q32P41 509 aaKnown RBP4.04□□□□□ -1.76
SMG1-206ENST00000562668 KLHL26Q53HC5 615 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 TIGD3Q6B0B8 471 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 NANOGP8Q6NSW7 305 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 SLC30A6Q6NXT4 461 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 BHLHB9Q6PI77 547 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 HACD2Q6Y1H2 254 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 LRRC74BQ6ZQY2 392 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 CPLX4Q7Z7G2 160 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 DHDDSQ86SQ9 333 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 MARCH3Q86UD3 253 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 MOGAT3Q86VF5 341 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 COMTD1Q86VU5 262 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 TMEM251Q8N6I4 163 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 TRIML2Q8N7C3 387 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 COX18Q8N8Q8 333 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 TMEM178AQ8NBL3 297 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 OR2M3Q8NG83 312 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 SLC38A5Q8WUX1 472 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 TAF15Q92804 592 aaKnown RBP eCLIP4.04□□□□□ -1.76
SMG1-206ENST00000562668 MAL2Q969L2 176 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 ROPN1LQ96C74 230 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 LRRC58Q96CX6 371 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 RCN3Q96D15 328 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 TMCO6Q96DC7 493 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 ZNF583Q96ND8 569 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 TRNT1Q96Q11 434 aaKnown RBP4.04□□□□□ -1.76
SMG1-206ENST00000562668 CGREF1Q99674 301 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 FAM173AQ9BQD7 235 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 OSBPL11Q9BXB4 747 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 OR2B2Q9GZK3 357 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 NSRP1Q9H0G5 558 aaKnown RBP4.04□□□□□ -1.76
SMG1-206ENST00000562668 TMEM38AQ9H6F2 299 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 KAT8Q9H7Z6 458 aaKnown RBP4.04□□□□□ -1.76
SMG1-206ENST00000562668 NANOGQ9H9S0 305 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 BCL2L10Q9HD36 194 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 A4GALTQ9NPC4 353 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 MRGBPQ9NV56 204 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 CMTM6Q9NX76 183 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 FBXL2Q9UKC9 423 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 MKLN1Q9UL63 735 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 PCDHGB4Q9UN71 923 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 FAF1Q9UNN5 650 aaPredicted RBP4.04□□□□□ -1.76
SMG1-206ENST00000562668 ABCG2Q9UNQ0 655 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 CARD8Q9Y2G2 431 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 ZNF835Q9Y2P0 537 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 C15orf41Q9Y2V0 281 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 OR10H1Q9Y4A9 318 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 WIF1Q9Y5W5 379 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 CAPN7Q9Y6W3 813 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.04□□□□□ -1.76
SMG1-206ENST00000562668 ZNF462Q96JM2 2506 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 NINQ8N4C6 2090 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 HEATR5AQ86XA9 2040 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 KIAA1549Q9HCM3 1950 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 FREM3P0C091 2139 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 SH2D7A6NKC9 451 aaPredicted RBP4.03□□□□□ -1.76
SMG1-206ENST00000562668 CLDN24A6NM45 220 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 FAM166BA8MTA8 275 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 B9A039 149 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 NME4O00746 187 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 ANGPT2O15123 496 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 ZNHIT1O43257 154 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 EFNA2O43921 213 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms