RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 TBC1D3GQ6DHY5 549 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 TBC1D3CQ6IPX1 549 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 C11orf87Q6NUJ2 197 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 FIGNL1Q6PIW4 674 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 C17orf64Q86WR6 236 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 TBC1D3Q8IZP1 549 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 OR5K2Q8NHB8 316 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 RNASE11Q8TAA1 199 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 INSM2Q96T92 566 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 EXO5Q9H790 373 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 PPP1R14DQ9NXH3 145 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 OBP2AQ9NY56 170 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 CXorf65A6NEN9 183 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 GGT3PA6NGU5 568 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 CD79AP11912 226 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 DPP4P27487 766 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 ADH6P28332 368 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 PTGER1P34995 402 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 KIR2DL1P43626 348 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 CSNK1EP49674 416 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 NUBP1P53384 320 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 OR2B8PP59922 312 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 OR7A5Q15622 319 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 MLF2Q15773 248 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 TMEM196Q5HYL7 178 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 ACOT7LQ6ZUV0 252 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 PARGQ86W56 976 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 FAM129CQ86XR2 697 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 KLHDC8AQ8IYD2 350 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 STEAP2Q8NFT2 490 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 OR51S1Q8NGJ8 323 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 NUBPLQ8TB37 319 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 ASB13Q8WXK3 278 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 TGIF2Q9GZN2 237 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 SLC25A18Q9H1K4 315 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 CCDC86Q9H6F5 360 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 MMP26Q9NRE1 261 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 COMMD9Q9P000 198 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 PPP4R1LQ9P1A2 415 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 TRPC4Q9UBN4 977 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 SCN3AQ9NY46 2000 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 MAGEB4O15481 346 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 HPGDP15428 266 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 CASRP41180 1078 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 RBP2P50120 134 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 PPP2CBP62714 309 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 PPP2CAP67775 309 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 MRPS10P82664 201 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 ILF3Q12906 894 aaKnown RBP eCLIP12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 SGCGQ13326 291 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 OVCH1Q7RTY7 1134 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 RD3Q7Z3Z2 195 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 AMER3Q8N944 861 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 ISOC2Q96AB3 205 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 S100PBPQ96BU1 408 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 SEC22AQ96IW7 307 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 TEAD3Q99594 435 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 OR51V1Q9H2C8 321 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 APMAPQ9HDC9 416 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 SEMA4GQ9NTN9 838 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 CLEC1BQ9P126 229 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 TRBV23OR9-2A0A075B6M9 112 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 IFITM5A6NNB3 132 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 NPIPB9F8W1W9 429 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 H0Y8X5 98 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 PLPP1O14494 284 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 SFTA3P0C7M3 94 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 CLDN2P57739 230 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 TAS2R20P59543 309 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 RNF4P78317 190 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 PJVKQ0ZLH3 352 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 NKAPLQ5M9Q1 402 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 ZNF620Q6ZNG0 422 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 OR6N1Q8NGY5 312 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 SLC39A7Q92504 469 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 RAB3CQ96E17 227 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 SLITRK2Q9H156 845 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 NRIP3Q9NQ35 241 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 RPS10P5Q9NQ39 176 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 POT1Q9NUX5 634 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 ANKRD10Q9NXR5 420 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 P2RX2Q9UBL9 471 aa12.8□□□□□ -0.36
GTF3C1-203ENST00000562609 hCG_1809904A0A1W2PP81 198 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 A0A1W2PR64 198 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 A0A1W2PRV1 198 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 FOXE1O00358 373 aaPredicted RBP12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 KCNAB3O43448 404 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 OR1F1O43749 312 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 CD8AP01732 235 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 COL9A1P20849 921 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 C5AR1P21730 350 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 TFF2Q03403 129 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 ZNF85Q03923 595 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 REC114Q7Z4M0 266 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 NRMQ8IXM6 262 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 WDR34Q96EX3 536 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 HSPA12BQ96MM6 686 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 MENTQ9BUN1 341 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 TEX101Q9BY14 249 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 UBQLN3Q9H347 655 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms