RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 ACTL6AO96019 429 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 ITGB2P05107 769 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 HSMCR30P0CW71 290 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 ZNF24P17028 368 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 NAA10P41227 235 aaPredicted RBP12.76□□□□□ -0.37
CNN2-204ENST00000562075 SRYQ05066 204 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 RUNX1T1Q06455 604 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 ZNF169Q14929 603 aaPredicted RBP12.76□□□□□ -0.37
CNN2-204ENST00000562075 RNFT1Q5M7Z0 435 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 EEF1A1P5Q5VTE0 462 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 INO80CQ6PI98 192 aaPredicted RBP12.76□□□□□ -0.37
CNN2-204ENST00000562075 DNM1P34Q6PK57 102 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 NHLRC1Q6VVB1 395 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 LHFPL3Q86UP9 236 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 OR6V1Q8N148 313 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 KLHL36Q8N4N3 616 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 ACBD7Q8N6N7 88 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 ZNRF4Q8WWF5 429 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 DGCR14Q96DF8 476 aaKnown RBP12.76□□□□□ -0.37
CNN2-204ENST00000562075 COG8Q96MW5 612 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 OR5M11Q96RB7 305 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 TBX5Q99593 518 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 EMC6Q9BV81 110 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 NUAK2Q9H093 628 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 RACGAP1Q9H0H5 632 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 ZDHHC11Q9H8X9 412 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 INPP5EQ9NRR6 644 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 LSM2Q9Y333 95 aaKnown RBP12.76□□□□□ -0.37
CNN2-204ENST00000562075 LIPGQ9Y5X9 500 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 FKBP7Q9Y680 259 aa12.76□□□□□ -0.37
CNN2-204ENST00000562075 TRGV5A0A0B4J1U4 118 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 DCTN6O00399 190 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 AHCYL1O43865 530 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 SELENOFO60613 162 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 SLC16A7O60669 478 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 IGHG1P01857 330 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 LIMS3P0CW19 117 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 LIMS4P0CW20 117 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 ZNF708P17019 499 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 CRABP1P29762 137 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 CENPAP49450 140 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 UCNP55089 124 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 WNT4P56705 351 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 CLDN15P56746 228 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 CLDN17P56750 224 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 CLDN18P56856 261 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 TMPRSS3P57727 454 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 CLRN1P58418 232 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 RPS3AP61247 264 aaKnown RBP12.75□□□□□ -0.37
CNN2-204ENST00000562075 POU4F3Q15319 338 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 SPHARQ15513 63 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 BCL2A1Q16548 175 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 ARMCX4Q5H9R4 360 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 LINC01590Q5TEZ4 76 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 ZBTB46Q86UZ6 589 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 SLC35F2Q8IXU6 374 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 SYT14Q8NB59 555 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 OR9K2Q8NGE7 335 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 NEIL3Q8TAT5 605 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 MED12Q93074 2177 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 CPNE4Q96A23 557 aaPredicted RBP12.75□□□□□ -0.37
CNN2-204ENST00000562075 ADAD1Q96M93 576 aaKnown RBP12.75□□□□□ -0.37
CNN2-204ENST00000562075 KCNK17Q96T54 332 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 TSPAN10Q9H1Z9 355 aaPredicted RBP12.75□□□□□ -0.37
CNN2-204ENST00000562075 ERVK13-1Q9NX77 482 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 RSL24D1Q9UHA3 163 aaKnown RBP12.75□□□□□ -0.37
CNN2-204ENST00000562075 B9D1Q9UPM9 204 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 PCDHGB7Q9Y5F8 929 aa12.75□□□□□ -0.37
CNN2-204ENST00000562075 KIAA1549Q9HCM3 1950 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 FREM2Q5SZK8 3169 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 IGLV1-36A0A0B4J1U3 117 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 SLC35F4A4IF30 521 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 ZNF726A6NNF4 738 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 SYNGR4O95473 234 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 TFP02787 698 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 BLVRAP53004 296 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 CAMK2DQ13557 499 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 SLC17A1Q14916 467 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 OR2G6Q5TZ20 316 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 CARD17Q5XLA6 110 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 LYPD4Q6UWN0 246 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 TMPRSS11AQ6ZMR5 421 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 CREB3L2Q70SY1 520 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 ERI1Q8IV48 349 aaKnown RBP12.74□□□□□ -0.37
CNN2-204ENST00000562075 WDFY1Q8IWB7 410 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 ZNF511Q8NB15 262 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 NOXO1Q8NFA2 376 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 OR52N1Q8NH53 320 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 OR6X1Q8NH79 312 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 ROBO4Q8WZ75 1007 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 ISOC1Q96CN7 298 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 YIPF6Q96EC8 236 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 SLC25A44Q96H78 314 aaPredicted RBP12.74□□□□□ -0.37
CNN2-204ENST00000562075 MGLLQ99685 303 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 ALG8Q9BVK2 526 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 SF3B5Q9BWJ5 86 aaKnown RBP12.74□□□□□ -0.37
CNN2-204ENST00000562075 MFRPQ9BY79 579 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 RAXQ9Y2V3 346 aa12.74□□□□□ -0.37
CNN2-204ENST00000562075 TNRC6AQ8NDV7 1962 aaKnown RBP12.73□□□□□ -0.37
CNN2-204ENST00000562075 TVP23AA6NH52 213 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms