RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 GOLGA8OA6NCC3 632 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 GOLGA8NF8WBI6 632 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 HPNP05981 417 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 ELK1P19419 428 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 SSR1P43307 286 aaKnown RBP4.3□□□□□ -1.72
SMG1-204ENST00000561940 ATP5IP56385 69 aaPredicted RBP4.3□□□□□ -1.72
SMG1-204ENST00000561940 TAS2R19P59542 299 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 IRX3P78415 501 aaPredicted RBP4.3□□□□□ -1.72
SMG1-204ENST00000561940 BEX3Q00994 111 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 BST2Q10589 180 aaKnown RBP4.3□□□□□ -1.72
SMG1-204ENST00000561940 ORC2Q13416 577 aaPredicted RBP4.3□□□□□ -1.72
SMG1-204ENST00000561940 GPR157Q5UAW9 335 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 CTRB2Q6GPI1 263 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 RNF165Q6ZSG1 346 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 ASCL5Q7RTU5 278 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 SLC34A3Q8N130 599 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 PNKDQ8N490 385 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 OR4F6Q8NGB9 312 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 OR6C4Q8NGE1 309 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 KCNG3Q8TAE7 436 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 PYROXD1Q8WU10 500 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 CCDC77Q9BR77 488 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 GPR61Q9BZJ8 451 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 PDFQ9HBH1 243 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 NEUROG3Q9Y4Z2 214 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 LAMC1P11047 1609 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 COL22A1Q8NFW1 1626 aaPredicted RBP4.3□□□□□ -1.72
SMG1-204ENST00000561940 TNS2Q63HR2 1409 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 SHANK3Q9BYB0 1731 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.29□□□□□ -1.72
SMG1-204ENST00000561940 CCDC169A6NNP5 214 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 TNFSF13O75888 250 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 KITLGP21583 273 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 HTR1EP28566 365 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 GLP1RP43220 463 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 ARRB1P49407 418 aaPredicted RBP4.29□□□□□ -1.72
SMG1-204ENST00000561940 DLX1P56177 255 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 TIMM10P62072 90 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 PSG7Q13046 419 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 DAZ2Q13117 558 aaKnown RBP4.29□□□□□ -1.72
SMG1-204ENST00000561940 SSX2Q16385 188 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 RNASEKQ6P5S7 137 aaKnown RBP4.29□□□□□ -1.72
SMG1-204ENST00000561940 PAQR7Q86WK9 346 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 TMEM61Q8N0U2 210 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 FNDC5Q8NAU1 212 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 SLC2A14Q8TDB8 520 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 UCN3Q969E3 161 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 RIOK1Q9BRS2 568 aaKnown RBP4.29□□□□□ -1.72
SMG1-204ENST00000561940 DAZ3Q9NR90 486 aaKnown RBP4.29□□□□□ -1.72
SMG1-204ENST00000561940 CSDC2Q9Y534 153 aaKnown RBP4.29□□□□□ -1.72
SMG1-204ENST00000561940 TRPM2O94759 1503 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 UTRNP46939 3433 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 ADGRL2O95490 1459 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 CCDC141Q6ZP82 1450 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 RGPD1P0DJD0 1748 aa4.29□□□□□ -1.72
SMG1-204ENST00000561940 BRWD3Q6RI45 1802 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 NEXMIFQ5QGS0 1516 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 EHBP1L1Q8N3D4 1523 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 ARHGAP21Q5T5U3 1957 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 C12orf77C9JDV5 145 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 KRTAP4-16G5E9R7 235 aaPredicted RBP4.28□□□□□ -1.72
SMG1-204ENST00000561940 PSTPIP1O43586 416 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 ZNF861PO60384 105 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 HMMRO75330 724 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 ERLIN1O75477 346 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 CIB2O75838 187 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 BBOX1O75936 387 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 MOSP00540 346 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 CHTF8P0CG12 524 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 FMO3P31513 532 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 CTRLP40313 264 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 GNMTQ14749 295 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 GPNMBQ14956 572 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 CASC10Q5T4H9 136 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 TRIM40Q6P9F5 258 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 LRRC74BQ6ZQY2 392 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 DCAF4L2Q8NA75 395 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 RDH5Q92781 318 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 SMARCD2Q92925 531 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 TM4SF19Q96DZ7 209 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 FCRL1Q96LA6 429 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 IFT74Q96LB3 600 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 OR8B4Q96RC9 309 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 MBOAT4Q96T53 435 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 TMEM246Q9BRR3 403 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 PELOQ9BRX2 385 aaKnown RBP4.28□□□□□ -1.72
SMG1-204ENST00000561940 PKIBQ9C010 78 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 GBA3Q9H227 469 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 PLGRKTQ9HBL7 147 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 ADAP2Q9NPF8 381 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 SLC2A8Q9NY64 477 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 SPATA7Q9P0W8 599 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 CLCF1Q9UBD9 225 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 IKZF2Q9UKS7 526 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 CASKIN1Q8WXD9 1431 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 PIK3C2BO00750 1634 aa4.28□□□□□ -1.72
SMG1-204ENST00000561940 NRKQ7Z2Y5 1582 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 PXDNQ92626 1479 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 PANO1I0J062 215 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 FAM189A1O60320 539 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms