RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ACADSP16219 412 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 CD53P19397 219 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 LOXP28300 417 aaPredicted RBP8.85□□□□□ -0.99
HERC1-212ENST00000561348 RRM2P31350 389 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 ACVR1BP36896 505 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 DAP3P51398 398 aaKnown RBP8.85□□□□□ -0.99
HERC1-212ENST00000561348 SH3BGRP55822 239 aaPredicted RBP8.85□□□□□ -0.99
HERC1-212ENST00000561348 ERVK-25P63136 954 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 MS4A2Q01362 244 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 PRKCDQ05655 676 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 ZP4Q12836 540 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 PPP1R8Q12972 351 aaKnown RBP8.85□□□□□ -0.99
HERC1-212ENST00000561348 TAF11Q15544 211 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 TSEN54Q7Z6J9 526 aaKnown RBP8.85□□□□□ -0.99
HERC1-212ENST00000561348 LRRC18Q8N456 261 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 C17orf78Q8N4C9 275 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 OR4K5Q8NGD3 323 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 OR6X1Q8NH79 312 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 SLC7A13Q8TCU3 470 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 SMAP2Q8WU79 429 aaPredicted RBP8.85□□□□□ -0.99
HERC1-212ENST00000561348 PIGTQ969N2 578 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 SLC25A44Q96H78 314 aaPredicted RBP8.85□□□□□ -0.99
HERC1-212ENST00000561348 C7orf34Q96L11 122 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 ADAD1Q96M93 576 aaKnown RBP8.85□□□□□ -0.99
HERC1-212ENST00000561348 RNF121Q9H920 327 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 KRCC1Q9NPI7 259 aaPredicted RBP8.85□□□□□ -0.99
HERC1-212ENST00000561348 GLTPQ9NZD2 209 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 ACTR3BQ9P1U1 418 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 PRPF19Q9UMS4 504 aaKnown RBP8.85□□□□□ -0.99
HERC1-212ENST00000561348 CSMD2Q7Z408 3487 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 ATP6V1G2-DDX39BF2Z307 99 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 H7C1C5 153 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 ARHGEF9O43307 516 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 TRMUO75648 421 aaKnown RBP8.84□□□□□ -0.99
HERC1-212ENST00000561348 PRSS23O95084 383 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 SLC2A10O95528 541 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 CELA3BP08861 270 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 CDKN1AP38936 164 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 PTDSS1P48651 473 aaKnown RBP8.84□□□□□ -0.99
HERC1-212ENST00000561348 CENPAP49450 140 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 FABP6P51161 128 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 ZNF84P51523 738 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 SMIM11AP58511 58 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 LCN6P62502 163 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 NKX6-1P78426 367 aaPredicted RBP8.84□□□□□ -0.99
HERC1-212ENST00000561348 CHRNB3Q05901 458 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 RUNX1T1Q06455 604 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 FMODQ06828 376 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 TRIM25Q14258 630 aaKnown RBP8.84□□□□□ -0.99
HERC1-212ENST00000561348 SEC23BQ15437 767 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 SGCAQ16586 387 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 ZNF672Q499Z4 452 aaPredicted RBP8.84□□□□□ -0.99
HERC1-212ENST00000561348 FAM98BQ52LJ0 330 aaKnown RBP8.84□□□□□ -0.99
HERC1-212ENST00000561348 C20orf204Q6ZNR8 217 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 SSX8Q7RTT4 187 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 MDP1Q86V88 176 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 SPATA24Q86W54 205 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 RNF113BQ8IZP6 322 aaKnown RBP8.84□□□□□ -0.99
HERC1-212ENST00000561348 ARHGAP24Q8N264 748 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 CLDN22Q8N7P3 220 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 ASB10Q8WXI3 467 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 NINJ1Q92982 152 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 ALPK1Q96QP1 1244 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 FOXB1Q99853 325 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 SH3GL3Q99963 347 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 KATNB1Q9BVA0 655 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 KRTAP3-3Q9BYR6 98 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 KRTAP3-2Q9BYR7 98 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 TRIM15Q9C019 465 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 NDEL1Q9GZM8 345 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 SEC61A2Q9H9S3 476 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 GRHPRQ9UBQ7 328 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 ZNF346Q9UL40 294 aaKnown RBP8.84□□□□□ -0.99
HERC1-212ENST00000561348 MGAT4BQ9UQ53 548 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 TMEM5Q9Y2B1 443 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 U3KQV3 271 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 CADP27708 2225 aa8.84□□□□□ -0.99
HERC1-212ENST00000561348 PRRC2AP48634 2157 aaKnown RBP8.83□□□□□ -1
HERC1-212ENST00000561348 IGHV1-18A0A0C4DH31 117 aa8.83□□□□□ -1
HERC1-212ENST00000561348 A0A1W2PPL8 197 aa8.83□□□□□ -1
HERC1-212ENST00000561348 A0A1W2PRQ8 180 aa8.83□□□□□ -1
HERC1-212ENST00000561348 UNC119BA6NIH7 251 aa8.83□□□□□ -1
HERC1-212ENST00000561348 RPL36A-HNRNPH2H7BZ11 118 aa8.83□□□□□ -1
HERC1-212ENST00000561348 TNFRSF11BO00300 401 aa8.83□□□□□ -1
HERC1-212ENST00000561348 SOCS2O14508 198 aa8.83□□□□□ -1
HERC1-212ENST00000561348 XKRYO14609 159 aa8.83□□□□□ -1
HERC1-212ENST00000561348 GNGT2O14610 69 aa8.83□□□□□ -1
HERC1-212ENST00000561348 CDC42EP2O14613 210 aa8.83□□□□□ -1
HERC1-212ENST00000561348 DHHO43323 396 aa8.83□□□□□ -1
HERC1-212ENST00000561348 FZD7O75084 574 aa8.83□□□□□ -1
HERC1-212ENST00000561348 FARS2O95363 451 aaKnown RBP8.83□□□□□ -1
HERC1-212ENST00000561348 RAB36O95755 333 aa8.83□□□□□ -1
HERC1-212ENST00000561348 CRYAAP02489 173 aa8.83□□□□□ -1
HERC1-212ENST00000561348 PGA4P0DJD7 388 aa8.83□□□□□ -1
HERC1-212ENST00000561348 PGA3P0DJD8 388 aa8.83□□□□□ -1
HERC1-212ENST00000561348 CDAP32320 146 aa8.83□□□□□ -1
HERC1-212ENST00000561348 GUCA1AP43080 201 aaPredicted RBP8.83□□□□□ -1
HERC1-212ENST00000561348 GIPRP48546 466 aa8.83□□□□□ -1
HERC1-212ENST00000561348 RPL27P61353 136 aaKnown RBP8.83□□□□□ -1
HERC1-212ENST00000561348 DGCR6Q14129 220 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms