RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 SOCS2O14508 198 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 DHHO43323 396 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 KHDRBS3O75525 346 aaKnown RBP9.45□□□□□ -0.9
TPM1-229ENST00000561242 UPK3AO75631 287 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 TRMUO75648 421 aaKnown RBP9.45□□□□□ -0.9
TPM1-229ENST00000561242 UBL3O95164 117 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 GASTP01350 101 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 SEMG1P04279 462 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 HLA-DOBP13765 273 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 ZNF823P16415 610 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 ZNF3P17036 446 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 KLK2P20151 261 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 IGHV1-2P23083 117 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 SDHAP31040 664 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 OMPP47874 163 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 RAD23AP54725 363 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 SELENOVP59797 346 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 ARF1P84077 181 aaKnown RBP9.45□□□□□ -0.9
TPM1-229ENST00000561242 MYBPC1Q00872 1141 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 GALK2Q01415 458 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 HSF2Q03933 536 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 LGALS3BPQ08380 585 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 PPP1R8Q12972 351 aaKnown RBP9.45□□□□□ -0.9
TPM1-229ENST00000561242 SNTB1Q13884 538 aaKnown RBP9.45□□□□□ -0.9
TPM1-229ENST00000561242 GUSBP1Q15486 140 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 ATP6AP1Q15904 470 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 CLEC12AQ5QGZ9 265 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 PGBD2Q6P3X8 592 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 SHQ1Q6PI26 577 aaKnown RBP9.45□□□□□ -0.9
TPM1-229ENST00000561242 ARL9Q6T311 187 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 RASSF6Q6ZTQ3 369 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 SLC16A14Q7RTX9 510 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 ZER1Q7Z7L7 766 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 MEX3DQ86XN8 651 aaKnown RBP9.45□□□□□ -0.9
TPM1-229ENST00000561242 GABRG1Q8N1C3 465 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 PAPD5Q8NDF8 572 aaKnown RBP9.45□□□□□ -0.9
TPM1-229ENST00000561242 NOXO1Q8NFA2 376 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 IL17RDQ8NFM7 739 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 OR9Q2Q8NGE9 314 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 OR1J2Q8NGS2 313 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 PYDC1Q8WXC3 89 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 SAMD8Q96LT4 415 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 FEVQ99581 238 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 FOXB1Q99853 325 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 C9orf16Q9BUW7 83 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 RSPO3Q9BXY4 272 aaPredicted RBP9.45□□□□□ -0.9
TPM1-229ENST00000561242 PAPOLBQ9NRJ5 636 aaKnown RBP9.45□□□□□ -0.9
TPM1-229ENST00000561242 MAN2C1Q9NTJ4 1040 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 FAIMQ9NVQ4 179 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 CRIM1Q9NZV1 1036 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 CDH10Q9Y6N8 788 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 ATRXP46100 2492 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 A0A096LPE4 126 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 TEX13CA0A0J9YWL9 993 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 A0A1W2PPZ6 126 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 ARRDC5A6NEK1 342 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 C12orf71A8MTZ7 269 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 TRAF3IP2O43734 574 aaPredicted RBP9.44□□□□□ -0.9
TPM1-229ENST00000561242 PRSS23O95084 383 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 PPP1R3DO95685 299 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 HPRP00739 348 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 CRYAAP02489 173 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 APEHP13798 732 aaKnown RBP9.44□□□□□ -0.9
TPM1-229ENST00000561242 PTAFRP25105 342 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 COL8A1P27658 744 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 GRNP28799 593 aaKnown RBP9.44□□□□□ -0.9
TPM1-229ENST00000561242 ARR3P36575 388 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 P2RY4P51582 365 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 BLVRAP53004 296 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 KRR1Q13601 381 aaKnown RBP9.44□□□□□ -0.9
TPM1-229ENST00000561242 SEC23BQ15437 767 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 TSC22D1Q15714 1073 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 SLC27A4Q6P1M0 643 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 LEG1Q6P5S2 330 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 SLC22A25Q6T423 547 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 AMIGO2Q86SJ2 522 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 TSPYL5Q86VY4 417 aaPredicted RBP9.44□□□□□ -0.9
TPM1-229ENST00000561242 ZIC4Q8N9L1 334 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 OR1K1Q8NGR3 316 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 OR2AJ1Q8NGZ0 328 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 MAGEE2Q8TD90 523 aaPredicted RBP9.44□□□□□ -0.9
TPM1-229ENST00000561242 ASB10Q8WXI3 467 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 MCHR2Q969V1 340 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 EME1Q96AY2 570 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 RBM4BQ9BQ04 359 aaKnown RBP9.44□□□□□ -0.9
TPM1-229ENST00000561242 RBM4Q9BWF3 364 aaKnown RBP9.44□□□□□ -0.9
TPM1-229ENST00000561242 DGCR6LQ9BY27 220 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 SEMA6AQ9H2E6 1030 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 SMURF2Q9HAU4 748 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 EIF3KQ9UBQ5 218 aaKnown RBP9.44□□□□□ -0.9
TPM1-229ENST00000561242 IL20RAQ9UHF4 553 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 SIGLEC7Q9Y286 467 aa9.44□□□□□ -0.9
TPM1-229ENST00000561242 A6NNC1 897 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 RPL36A-HNRNPH2H7BZ11 118 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 CDC42EP2O14613 210 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 SLC16A7O60669 478 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 PTP4A3O75365 173 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 OSMP13725 252 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 APLNRP35414 380 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 GSSP48637 474 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms