RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ZNF442Q9H7R0 627 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 NTN4Q9HB63 628 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 SLC40A1Q9NP59 571 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 EXOSC4Q9NPD3 245 aaKnown RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 TIGARQ9NQ88 270 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 SPANXB1Q9NS25 103 aaPredicted RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 ABCC13Q9NSE7 274 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 PAK1IP1Q9NWT1 392 aaPredicted RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 CLN6Q9NWW5 311 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 NDE1Q9NXR1 346 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 STMN3Q9NZ72 180 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 EHFQ9NZC4 300 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 TAAR2Q9P1P5 351 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 RSPH14Q9UHP6 348 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 CLEC2DQ9UHP7 191 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 STOML2Q9UJZ1 356 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 RAB23Q9ULC3 237 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 PPP1R3CQ9UQK1 317 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 CFL2Q9Y281 166 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 NTNG1Q9Y2I2 539 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 MRPS28Q9Y2Q9 187 aaKnown RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 FBXO7Q9Y3I1 522 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 TSSC4Q9Y5U2 329 aaPredicted RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 ZCCHC6Q5VYS8 1495 aaKnown RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 MYH14Q7Z406 1995 aaKnown RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 FANCIQ9NVI1 1328 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 TRAV8-7A0A075B6U6 113 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 GLYATL1P3A0A0U1RQE8 302 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 A0A1B0GW55 424 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 MEX3AA1L020 520 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 ISPDA4D126 451 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 TVP23AA6NH52 213 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 VSTM2BA6NLU5 285 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 USP27XA6NNY8 438 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 EFCAB7A8K855 629 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 HIDE1A8MVS5 230 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 TMEM114B3SHH9 223 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 E5RI56 91 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ZNF587BE7ETH6 402 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 LRRN3E7EW58 273 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 LOC110117498-PIK3R3F6TDL0 507 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 HSD17B6O14756 317 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ZBTB5O15062 677 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 INSIG1O15503 277 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 EMC8O43402 210 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 MBTPS2O43462 519 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 DENRO43583 198 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 GATCO43716 136 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 NARSO43776 548 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 PRKNO60260 465 aaPredicted RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 GMDSO60547 372 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 SLC16A7O60669 478 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 CLDN11O75508 207 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 RBMXL2O75526 392 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 TDP2O95551 362 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 C1orf105O95561 183 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 TSPAN13O95857 204 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 CD160O95971 181 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 NGFP01138 241 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 CRYABP02511 175 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 FGF1P05230 155 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 UMODP07911 640 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 CT62P0C5K7 136 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 DUX4L2P0CJ85 424 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 DUX4L3P0CJ86 424 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 DUX4L4P0CJ87 422 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 DUX4L5P0CJ88 424 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 DUX4L6P0CJ89 424 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 DUX4L7P0CJ90 424 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 GFAPP14136 432 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 MYOGP15173 224 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 TBPP20226 339 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 RAB5AP20339 215 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 CXCR2P25025 360 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 OR1E1P30953 314 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 SHMT2P34897 504 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 MAP2K2P36507 400 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 DCTP40126 519 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 GDF5P43026 501 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 MAGEA6P43360 314 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 PRELPP51888 382 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 HNRNPA3P51991 378 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 AP2S1P53680 142 aaPredicted RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 EMP2P54851 167 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 DLX5P56178 289 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 AP1S2P56377 157 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ARPC4P59998 168 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 SNRPD1P62314 119 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 SP4Q02446 784 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 TFF2Q03403 129 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ZNF85Q03923 595 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 GLO1Q04760 184 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ST3GAL4Q11206 333 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ZNF154Q13106 437 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 PRPSAP1Q14558 356 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 KCNJ11Q14654 390 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 CLINT1Q14677 625 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ZNHIT3Q15649 155 aaPredicted RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms