RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 DCTN6O00399 190 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 PHYHO14832 338 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 SELENOFO60613 162 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 CLPXO76031 633 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 LALBAP00709 142 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 GAAP10253 952 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 GPR85P60893 370 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 CLN3Q13286 438 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 TOMM20Q15388 145 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 TRAM1Q15629 374 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 TBC1D25Q3MII6 688 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 ATP1A1-AS1Q5TC04 95 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 TMEM225Q6GV28 225 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 SLC25A25Q6KCM7 469 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 CD200R1LQ6Q8B3 271 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 VASH1Q7L8A9 365 aaPredicted RBP15.33■□□□□ 0.04
HDDC3-206ENST00000561036 CDC20BQ86Y33 519 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 KDM8Q8N371 416 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 HAS2Q92819 552 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 DACH2Q96NX9 599 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 CENPOQ9BU64 300 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 CCDC59Q9P031 241 aaKnown RBP15.33■□□□□ 0.04
HDDC3-206ENST00000561036 KLHL13Q9P2N7 655 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 TMEM14AQ9Y6G1 99 aa15.33■□□□□ 0.04
HDDC3-206ENST00000561036 TRDV1A0A1B0GX56 115 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 PINLYPA6NC86 204 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 J3QLW9 94 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 NKX2-8O15522 239 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 NME2P1O60361 137 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 SLC16A7O60669 478 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 OPN1LWP04000 364 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 HPNP05981 417 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 SP1P08047 785 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 RFPL3SP0C7P2 107 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 CD46P15529 392 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 ZNF19P17023 458 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 CELP19835 753 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 NME2P22392 152 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 GDF1P27539 372 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 FGF9P31371 208 aaPredicted RBP15.32■□□□□ 0.04
HDDC3-206ENST00000561036 AGFG1P52594 562 aaKnown RBP15.32■□□□□ 0.04
HDDC3-206ENST00000561036 RPS3AP61247 264 aaKnown RBP15.32■□□□□ 0.04
HDDC3-206ENST00000561036 NHLH1Q02575 133 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 C19orf57Q0VDD7 668 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 DBPQ10586 325 aaPredicted RBP15.32■□□□□ 0.04
HDDC3-206ENST00000561036 MRPL28Q13084 256 aaKnown RBP15.32■□□□□ 0.04
HDDC3-206ENST00000561036 MELKQ14680 651 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 POU4F3Q15319 338 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 HYAL4Q2M3T9 481 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 PLEKHG7Q6ZR37 379 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 YRDCQ86U90 279 aaKnown RBP15.32■□□□□ 0.04
HDDC3-206ENST00000561036 SULF2Q8IWU5 870 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 ZNF511Q8NB15 262 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 OR6X1Q8NH79 312 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 FNDC8Q8TC99 324 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 SNX33Q8WV41 574 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 RELTQ969Z4 430 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 C4orf36Q96KX1 117 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 ADAD1Q96M93 576 aaKnown RBP15.32■□□□□ 0.04
HDDC3-206ENST00000561036 SFXN2Q96NB2 322 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 INTS14Q96SY0 518 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 MFRPQ9BY79 579 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 WDR76Q9H967 626 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 PLA2G3Q9NZ20 509 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 ZMIZ1Q9ULJ6 1067 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 A3GALT2U3KPV4 340 aa15.32■□□□□ 0.04
HDDC3-206ENST00000561036 A0A0J9YW62 118 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 TRABD2BA6NFA1 517 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 FAM171A2A8MVW0 826 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 KLRC4-KLRK1H3BQV0 150 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 PLPP2O43688 288 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 TRAF3IP2O43734 574 aaPredicted RBP15.31■□□□□ 0.04
HDDC3-206ENST00000561036 KHDRBS3O75525 346 aaKnown RBP15.31■□□□□ 0.04
HDDC3-206ENST00000561036 TRAPPC6AO75865 159 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 F10P00742 488 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 HLA-DPB1P04440 258 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 CD1AP06126 327 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 SDHBP21912 280 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 PEX19P40855 299 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 GBX2P52951 348 aaPredicted RBP15.31■□□□□ 0.04
HDDC3-206ENST00000561036 BIDP55957 195 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 OR12D2P58182 307 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 RAC3P60763 192 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 CDC20Q12834 499 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 CCDC58Q4VC31 144 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 THEM4Q5T1C6 240 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 ESPNLQ6ZVH7 1005 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 SSX6Q7RTT6 188 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 TBC1D15Q8TC07 691 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 MRPL13Q9BYD1 178 aaKnown RBP15.31■□□□□ 0.04
HDDC3-206ENST00000561036 ZNF703Q9H7S9 590 aaPredicted RBP15.31■□□□□ 0.04
HDDC3-206ENST00000561036 EXOSC4Q9NPD3 245 aaKnown RBP15.31■□□□□ 0.04
HDDC3-206ENST00000561036 QPCTLQ9NXS2 382 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 GSTK1Q9Y2Q3 226 aa15.31■□□□□ 0.04
HDDC3-206ENST00000561036 HSPB2A8KAH6 182 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 OGG1O15527 345 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 GLSO94925 669 aaPredicted RBP15.3■□□□□ 0.04
HDDC3-206ENST00000561036 IGHG1P01857 330 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 TACSTD2P09758 323 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 PRKAR1AP10644 381 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms