RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 PCBP3P57721 371 aaKnown RBP8□□□□□ -1.13
HERC1-210ENST00000560897 RAB39AQ14964 217 aa8□□□□□ -1.13
HERC1-210ENST00000560897 CFAP157Q5JU67 520 aa8□□□□□ -1.13
HERC1-210ENST00000560897 HHATQ5VTY9 493 aa8□□□□□ -1.13
HERC1-210ENST00000560897 C6orf89Q6UWU4 347 aa8□□□□□ -1.13
HERC1-210ENST00000560897 OIT3Q8WWZ8 545 aa8□□□□□ -1.13
HERC1-210ENST00000560897 RAB40AQ8WXH6 277 aa8□□□□□ -1.13
HERC1-210ENST00000560897 CCDC126Q96EE4 140 aa8□□□□□ -1.13
HERC1-210ENST00000560897 TSSK3Q96PN8 268 aa8□□□□□ -1.13
HERC1-210ENST00000560897 PRPF18Q99633 342 aaKnown RBP8□□□□□ -1.13
HERC1-210ENST00000560897 BCL2L14Q9BZR8 327 aa8□□□□□ -1.13
HERC1-210ENST00000560897 DPAGT1Q9H3H5 408 aa8□□□□□ -1.13
HERC1-210ENST00000560897 TOR3AQ9H497 397 aa8□□□□□ -1.13
HERC1-210ENST00000560897 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8□□□□□ -1.13
HERC1-210ENST00000560897 EXD2Q9NVH0 621 aa8□□□□□ -1.13
HERC1-210ENST00000560897 LGALS13Q9UHV8 139 aa8□□□□□ -1.13
HERC1-210ENST00000560897 ZNF816-ZNF321PA0A0X1KG74 233 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 E9PQ18 207 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 SPAG7O75391 227 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 IGHV1-46P01743 117 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 MYL2P10916 166 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 B4GALT1P15291 398 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 GCAP28676 217 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 CRHR1P34998 444 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 SOAT1P35610 550 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 HPCAL1P37235 193 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 MAGOHP61326 146 aaKnown RBP7.99□□□□□ -1.13
HERC1-210ENST00000560897 BTG1P62324 171 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 HPCAP84074 193 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 CDK5R2Q13319 367 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 PMS2P3Q13401 168 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 UNC50Q53HI1 259 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 ZNF678Q5SXM1 525 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 AGBL2Q5U5Z8 902 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 RNF130Q86XS8 419 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 SLC22A9Q8IVM8 553 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 DDIASQ8IXT1 998 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 MUC20Q8N307 709 aaPredicted RBP7.99□□□□□ -1.13
HERC1-210ENST00000560897 POU5F2Q8N7G0 328 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 C11orf44Q8N8P7 122 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 SLC30A7Q8NEW0 376 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 CLHC1Q8NHS4 586 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 SFXN5Q8TD22 340 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 DYDC1Q8WWB3 177 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 GATAD2BQ8WXI9 593 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 ZNF837Q96EG3 531 aaPredicted RBP7.99□□□□□ -1.13
HERC1-210ENST00000560897 METTL2AQ96IZ6 378 aaKnown RBP7.99□□□□□ -1.13
HERC1-210ENST00000560897 PLEKHA8Q96JA3 519 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 CCT7Q99832 543 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 B9D2Q9BPU9 175 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 ZNF350Q9GZX5 532 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 LRMDAQ9H2I8 198 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 TMBIM4Q9HC24 238 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 CYSLTR2Q9NS75 346 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 GPATCH2Q9NW75 528 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 KCNE5Q9UJ90 142 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 WDR45Q9Y484 360 aa7.99□□□□□ -1.13
HERC1-210ENST00000560897 TENM2Q9NT68 2774 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 ANKRD61A6NGH8 418 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 HMGB1P1B2RPK0 211 aaPredicted RBP7.98□□□□□ -1.13
HERC1-210ENST00000560897 F5H0A9 414 aaPredicted RBP7.98□□□□□ -1.13
HERC1-210ENST00000560897 TM9SF1O15321 606 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 CFLARO15519 480 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 FCMRO60667 390 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 ENTPD5O75356 428 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 BCAS1O75363 584 aaPredicted RBP7.98□□□□□ -1.13
HERC1-210ENST00000560897 IGHV4-59P01825 116 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 SERPINA5P05154 406 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 CPA3P15088 417 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 RPS2P15880 293 aaKnown RBP7.98□□□□□ -1.13
HERC1-210ENST00000560897 MATN1P21941 496 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 GABRA5P31644 462 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 RPL3P39023 403 aaKnown RBP7.98□□□□□ -1.13
HERC1-210ENST00000560897 MDH2P40926 338 aaKnown RBP7.98□□□□□ -1.13
HERC1-210ENST00000560897 P2RY4P51582 365 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 ERVS71-1P61550 626 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 KCNJ10P78508 379 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 DCTN2Q13561 401 aaKnown RBP7.98□□□□□ -1.13
HERC1-210ENST00000560897 TBC1D28Q2M2D7 210 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 ARHGAP11BQ3KRB8 267 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 LSM12Q3MHD2 195 aaKnown RBP7.98□□□□□ -1.13
HERC1-210ENST00000560897 ZMAT1Q5H9K5 638 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 ATAD3BQ5T9A4 648 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 LRRC28Q86X40 367 aaPredicted RBP7.98□□□□□ -1.13
HERC1-210ENST00000560897 ANKRD42Q8N9B4 389 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 SCCPDHQ8NBX0 429 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 OR4F17Q8NGA8 305 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 OR1J2Q8NGS2 313 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 GEMIN6Q8WXD5 167 aaKnown RBP7.98□□□□□ -1.13
HERC1-210ENST00000560897 OR5P2Q8WZ92 322 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 ITPKCQ96DU7 683 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 MTERF3Q96E29 417 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 APOPT1Q96IL0 206 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 ATP6V1G3Q96LB4 118 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 TMEM237Q96Q45 408 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 OR4F4Q96R69 305 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 NUDT16L1Q9BRJ7 211 aaKnown RBP7.98□□□□□ -1.13
HERC1-210ENST00000560897 SLC19A3Q9BZV2 496 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 TRIM15Q9C019 465 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 C1orf198Q9H425 327 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms