RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 SLC25A44Q96H78 314 aaPredicted RBP10.85□□□□□ -0.67
HERC1-205ENST00000559886 ADAD1Q96M93 576 aaKnown RBP10.85□□□□□ -0.67
HERC1-205ENST00000559886 TUBA1CQ9BQE3 449 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 MRPL13Q9BYD1 178 aaKnown RBP10.85□□□□□ -0.67
HERC1-205ENST00000559886 SYT4Q9H2B2 425 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 ERVK-18Q9QC07 812 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 WARS2Q9UGM6 360 aaKnown RBP10.85□□□□□ -0.67
HERC1-205ENST00000559886 PKD1L2Q7Z442 2459 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 TRIM64CA6NLI5 447 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 MRPS14O60783 128 aaKnown RBP10.84□□□□□ -0.67
HERC1-205ENST00000559886 CLDN17P56750 224 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 PIGFQ07326 219 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 RASGEF1BQ0VAM2 473 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 ST3GAL4Q11206 333 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 KLHL22Q53GT1 634 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 KRTCAP3Q53RY4 240 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 TMEM154Q6P9G4 183 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 OR6V1Q8N148 313 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 TEX19Q8NA77 164 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 FNDC9Q8TBE3 224 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 MYDGFQ969H8 173 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 RNFT2Q96EX2 444 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 TSSK2Q96PF2 358 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 ZNF385AQ96PM9 386 aaKnown RBP10.84□□□□□ -0.67
HERC1-205ENST00000559886 HAO2Q9NYQ3 351 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 ING1Q9UK53 422 aaPredicted RBP10.84□□□□□ -0.67
HERC1-205ENST00000559886 FLVCR1Q9Y5Y0 555 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 MED12LQ86YW9 2145 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 IGKV3D-15A0A087WSY6 115 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 DCTN6O00399 190 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 RGS10O43665 173 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 CDK1P06493 297 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 TUBA4AP68366 448 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 LGALS3BPQ08380 585 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 RAB40BQ12829 278 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 SLC35D3Q5M8T2 416 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 PRSS48Q7RTY5 328 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 ADGRE4PQ86SQ3 457 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 ZBTB46Q86UZ6 589 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 OR2T4Q8NH00 348 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 ABHD3Q8WU67 409 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 ZNRF4Q8WWF5 429 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 LGALS12Q96DT0 336 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 ALG12Q9BV10 488 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 MRPS26Q9BYN8 205 aaKnown RBP10.84□□□□□ -0.67
HERC1-205ENST00000559886 NUAK2Q9H093 628 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 SLC25A18Q9H1K4 315 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 FKBP7Q9Y680 259 aa10.84□□□□□ -0.67
HERC1-205ENST00000559886 ZNF726A6NNF4 738 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 AQP8O94778 261 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 IGHG1P01857 330 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 STSP08842 583 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 PGA4P0DJD7 388 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 PGA3P0DJD8 388 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 ATP6V1B1P15313 513 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 GSTT1P30711 240 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 RPS7P62081 194 aaKnown RBP10.83□□□□□ -0.68
HERC1-205ENST00000559886 MVKQ03426 396 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 CAMK2DQ13557 499 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 LINC01590Q5TEZ4 76 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 B3GLCTQ6Y288 498 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 FGD2Q7Z6J4 655 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 STX19Q8N4C7 294 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 CISD2Q8N5K1 135 aaKnown RBP10.83□□□□□ -0.68
HERC1-205ENST00000559886 SYT14Q8NB59 555 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 FAR1Q8WVX9 515 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 SRA1Q9HD15 236 aaKnown RBP10.83□□□□□ -0.68
HERC1-205ENST00000559886 KLHL9Q9P2J3 617 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 MOKQ9UQ07 419 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 EXOGQ9Y2C4 368 aaKnown RBP10.83□□□□□ -0.68
HERC1-205ENST00000559886 ZNF175Q9Y473 711 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 IRGMA1A4Y4 181 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 CENPBD1B2RD01 187 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 ZNHIT1O43257 154 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 ZNF432O94892 652 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 GLCEO94923 617 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 SFTPCP11686 197 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 C21orf33P30042 268 aaPredicted RBP10.83□□□□□ -0.68
HERC1-205ENST00000559886 C19orf48Q6RUI8 117 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 PLXDC2Q6UX71 529 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 B3GNT6Q6ZMB0 384 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 SPARTQ8N0X7 666 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 TMEM123Q8N131 208 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 OR51L1Q8NGJ5 315 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 OR52I1Q8NGK6 324 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 NMD3Q96D46 503 aaKnown RBP10.83□□□□□ -0.68
HERC1-205ENST00000559886 OR2M2Q96R28 347 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 PRRG4Q9BZD6 226 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 FGF20Q9NP95 211 aaPredicted RBP10.83□□□□□ -0.68
HERC1-205ENST00000559886 B9D1Q9UPM9 204 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 RCE1Q9Y256 329 aa10.83□□□□□ -0.68
HERC1-205ENST00000559886 GPR171O14626 319 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 CLPTM1O96005 669 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 MT-ND2P03891 347 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 ADRA2AP08913 450 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 CTLA4P16410 223 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 CRABP1P29762 137 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 PYCR1P32322 319 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 KLRB1Q12918 225 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 BLMHQ13867 455 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms