RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 CA14Q9ULX7 337 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 IGKV3D-11A0A0A0MRZ8 115 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 H3BMH7 237 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 FCER2P06734 321 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 ALOX5APP20292 161 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 CXCR1P25024 350 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 TAS2R20P59543 309 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 EBPQ15125 230 aaKnown RBP9.09□□□□□ -0.95
LRRC28-216ENST00000559819 EEF1A1P5Q5VTE0 462 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 ZNF767PQ75MW2 155 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 GLB1L2Q8IW92 636 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 PCNPQ8WW12 178 aaKnown RBP9.09□□□□□ -0.95
LRRC28-216ENST00000559819 S100A16Q96FQ6 103 aaKnown RBP9.09□□□□□ -0.95
LRRC28-216ENST00000559819 KLHL15Q96M94 604 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 CMTM3Q96MX0 182 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 INTS14Q96SY0 518 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 CHIAQ9BZP6 476 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 SEMA4CQ9C0C4 833 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 SLITRK2Q9H156 845 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 RANBP3Q9H6Z4 567 aaPredicted RBP9.09□□□□□ -0.95
LRRC28-216ENST00000559819 DLL4Q9NR61 685 aa9.09□□□□□ -0.95
LRRC28-216ENST00000559819 RHPN2P1A8MT19 583 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 NDUFB5O43674 189 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 PEX14O75381 377 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 WNT11O96014 354 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 HLA-DQA2P01906 255 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 CD27P26842 260 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 EFNB2P52799 333 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 PER3P56645 1201 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 CFHR1Q03591 330 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 PLCXD2Q0VAA5 305 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 CAMK2DQ13557 499 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 ETFDHQ16134 617 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 HYAL4Q2M3T9 481 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 LINC00303Q3SY05 128 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 WDR38Q5JTN6 314 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 C16orf47Q6ZP98 133 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-216ENST00000559819 NLRC3Q7RTR2 1065 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 FCAMRQ8WWV6 532 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 TMEM106AQ96A25 262 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 HAVCR1Q96D42 359 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 MESP1Q9BRJ9 268 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 UCK1Q9HA47 277 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 GTF2A1LQ9UNN4 478 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 SLC22A13Q9Y226 551 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 ANXA2P2A6NMY6 339 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 DOK2O60496 412 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 CDC40O60508 579 aaKnown RBP eCLIP9.08□□□□□ -0.96
LRRC28-216ENST00000559819 IGF2P01344 180 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 ANXA2P07355 339 aaKnown RBP9.08□□□□□ -0.96
LRRC28-216ENST00000559819 ANXA7P20073 488 aaKnown RBP9.08□□□□□ -0.96
LRRC28-216ENST00000559819 PSMB1P20618 241 aaKnown RBP9.08□□□□□ -0.96
LRRC28-216ENST00000559819 IL11P20809 199 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 ART1P52961 327 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 MELKQ14680 651 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 NSDHLQ15738 373 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 MEP1BQ16820 701 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 LGALSLQ3ZCW2 172 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-216ENST00000559819 SLC25A25Q6KCM7 469 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 MAMSTRQ6ZN01 415 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 LANCL3Q6ZV70 420 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 MDGA2Q7Z553 956 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 KCTD20Q7Z5Y7 419 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 C17orf82Q86X59 251 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-216ENST00000559819 OMA1Q96E52 524 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 WDR89Q96FK6 387 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-216ENST00000559819 ZDHHC12Q96GR4 267 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 PTDSS2Q9BVG9 487 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 OR11A1Q9GZK7 315 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 METTL17Q9H7H0 456 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-216ENST00000559819 MMACHCQ9Y4U1 282 aa9.08□□□□□ -0.96
LRRC28-216ENST00000559819 TRBV5-7A0A0A0MS05 114 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 IGHV3-20A0A0C4DH32 117 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 METTL12A8MUP2 240 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 G3V3Q6 166 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 TSPAN2O60636 221 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF254O75437 659 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 CALCBP10092 127 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 FOLR1P15328 257 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 DNASE1P24855 282 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 ARL4DP49703 201 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 ACKR1Q16570 336 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 C14orf28Q4W4Y0 310 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 EMC4Q5J8M3 183 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 FAM69AQ5T7M9 428 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 HLA-DQA1Q5Y7H0 255 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 OR5M10Q6IEU7 315 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 BIVMQ86UB2 503 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 SIX5Q8N196 739 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 KDM8Q8N371 416 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 FAM174AQ8TBP5 190 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 MIB2Q96AX9 1013 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 NPAS1Q99742 590 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 DPCDQ9BVM2 203 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-216ENST00000559819 TBL1XR1Q9BZK7 514 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF436Q9C0F3 470 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-216ENST00000559819 WWTR1Q9GZV5 400 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 HEXA-AS1Q9H8Q6 139 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 ELOVL3Q9HB03 270 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 TAS2R10Q9NYW0 307 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms