RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 TESQ9UGI8 421 aaKnown RBP9.15□□□□□ -0.94
TRAF3-207ENST00000559734 LEF1Q9UJU2 399 aaPredicted RBP9.15□□□□□ -0.94
TRAF3-207ENST00000559734 PURGQ9UJV8 347 aaKnown RBP9.15□□□□□ -0.94
TRAF3-207ENST00000559734 SOX21Q9Y651 276 aaPredicted RBP9.15□□□□□ -0.94
TRAF3-207ENST00000559734 MDFIC2A0A1B0GVS7 189 aa9.14□□□□□ -0.95
TRAF3-207ENST00000559734 SLC22A23A1A5C7 686 aa9.14□□□□□ -0.95
TRAF3-207ENST00000559734 TRAF3IP2O43734 574 aaPredicted RBP9.14□□□□□ -0.95
TRAF3-207ENST00000559734 ZNF500O60304 480 aaPredicted RBP9.14□□□□□ -0.95
TRAF3-207ENST00000559734 CRYBA1P05813 215 aa9.14□□□□□ -0.95
TRAF3-207ENST00000559734 MTNR1AP48039 350 aa9.14□□□□□ -0.95
TRAF3-207ENST00000559734 HOXC5Q00444 222 aa9.14□□□□□ -0.95
TRAF3-207ENST00000559734 EMX2Q04743 252 aa9.14□□□□□ -0.95
TRAF3-207ENST00000559734 HNRNPA0Q13151 305 aaKnown RBP9.14□□□□□ -0.95
TRAF3-207ENST00000559734 SPANXN4Q5MJ08 99 aa9.14□□□□□ -0.95
TRAF3-207ENST00000559734 COX20Q5RI15 118 aa9.14□□□□□ -0.95
TRAF3-207ENST00000559734 SERPINA11Q86U17 422 aa9.14□□□□□ -0.95
TRAF3-207ENST00000559734 LRRC34Q8IZ02 419 aa9.14□□□□□ -0.95
TRAF3-207ENST00000559734 PAQR4Q8N4S7 273 aaPredicted RBP9.14□□□□□ -0.95
TRAF3-207ENST00000559734 SLC30A7Q8NEW0 376 aa9.14□□□□□ -0.95
TRAF3-207ENST00000559734 C11orf40Q8WZ69 217 aa9.14□□□□□ -0.95
TRAF3-207ENST00000559734 DCLRE1CQ96SD1 692 aaKnown RBP9.14□□□□□ -0.95
TRAF3-207ENST00000559734 PARD6BQ9BYG5 372 aa9.14□□□□□ -0.95
TRAF3-207ENST00000559734 NKIRAS2Q9NYR9 191 aa9.14□□□□□ -0.95
TRAF3-207ENST00000559734 FBXL3Q9UKT7 428 aa9.14□□□□□ -0.95
TRAF3-207ENST00000559734 ZNF443Q9Y2A4 671 aaPredicted RBP9.14□□□□□ -0.95
TRAF3-207ENST00000559734 IGLV3-9A0A075B6K5 115 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 CCDC154A6NI56 674 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 ZNF726A6NNF4 738 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 CLDN34H7C241 214 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 TIMM23O14925 209 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 HOXA3O43365 443 aaPredicted RBP9.13□□□□□ -0.95
TRAF3-207ENST00000559734 HPRP00739 348 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 SERPINA5P05154 406 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 SBK2P0C263 348 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 HLA-DOBP13765 273 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 ZNF81P51508 661 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 RAG2P55895 527 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 EGR4Q05215 589 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 CASP8Q14790 479 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 KRT71Q3SY84 523 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 RPS26P11Q5JNZ5 115 aaPredicted RBP9.13□□□□□ -0.95
TRAF3-207ENST00000559734 C16orf87Q6PH81 154 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 H1FNTQ75WM6 255 aaPredicted RBP9.13□□□□□ -0.95
TRAF3-207ENST00000559734 SNX32Q86XE0 403 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 SKA3Q8IX90 412 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 PARP8Q8N3A8 854 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 CLIP4Q8N3C7 705 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 OR4F5Q8NH21 305 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 FGFBP3Q8TAT2 258 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 TAAR8Q969N4 342 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 TXNDC15Q96J42 360 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 PANX1Q96RD7 426 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 DENND2DQ9H6A0 471 aaPredicted RBP9.13□□□□□ -0.95
TRAF3-207ENST00000559734 RNF121Q9H920 327 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 BEX1Q9HBH7 125 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 RPS6KB2Q9UBS0 482 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 MMP24Q9Y5R2 645 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 WNK2Q9Y3S1 2297 aa9.13□□□□□ -0.95
TRAF3-207ENST00000559734 PPIAL4EA0A075B759 164 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 PPIAL4CA0A0B4J2A2 164 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 PPIAL4DF5H284 164 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 TRAPPC2LH3BP13 241 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 RGS16O15492 202 aaPredicted RBP9.12□□□□□ -0.95
TRAF3-207ENST00000559734 OR2T1O43869 369 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 IGHV1-46P01743 117 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 IGHMP01871 453 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 BCHEP06276 602 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 PPIAL4FP0DN26 164 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 IGHV4-38-2P0DP08 117 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 ZNF250P15622 560 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 ZNF12P17014 697 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 S100A3P33764 101 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 CSNK1A1P48729 337 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 NME5P56597 212 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 SEC61A1P61619 476 aaKnown RBP9.12□□□□□ -0.95
TRAF3-207ENST00000559734 SLC3A1Q07837 685 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 LARS2Q15031 903 aaKnown RBP9.12□□□□□ -0.95
TRAF3-207ENST00000559734 TBC1D28Q2M2D7 210 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 TUSC1Q2TAM9 212 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 FAM69AQ5T7M9 428 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 OLFML2AQ68BL7 652 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 ZNF621Q6ZSS3 439 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 NUDCD3Q8IVD9 361 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 TRIML2Q8N7C3 387 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 OR52E2Q8NGJ4 325 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 ZNF519Q8TB69 540 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 GEMIN6Q8WXD5 167 aaKnown RBP9.12□□□□□ -0.95
TRAF3-207ENST00000559734 SLC38A4Q969I6 547 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 PKNOX2Q96KN3 472 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 SH3GL3Q99963 347 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 RBM4BQ9BQ04 359 aaKnown RBP9.12□□□□□ -0.95
TRAF3-207ENST00000559734 SSU72Q9NP77 194 aaKnown RBP9.12□□□□□ -0.95
TRAF3-207ENST00000559734 ASIC5Q9NY37 505 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 P2RX2Q9UBL9 471 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 RAB21Q9UL25 225 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 INSIG2Q9Y5U4 225 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 ARHGAP32A7KAX9 2087 aa9.12□□□□□ -0.95
TRAF3-207ENST00000559734 VWFP04275 2813 aa9.11□□□□□ -0.95
TRAF3-207ENST00000559734 TRAV40A0A0B4J280 105 aa9.11□□□□□ -0.95
TRAF3-207ENST00000559734 A0A1B0GUS0 222 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms