RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 CFPP27918 469 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 CSNK1A1P48729 337 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 SEC24CP53992 1094 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 CDH12P55289 794 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 TMEM33P57088 247 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 STX1BP61266 288 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 SCGB2A2Q13296 93 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 SCARB2Q14108 478 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 RAB39AQ14964 217 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 MAD2L1BPQ15013 274 aaPredicted RBP11.22□□□□□ -0.61
TPM1-220ENST00000559556 GKAP1Q5VSY0 366 aaPredicted RBP11.22□□□□□ -0.61
TPM1-220ENST00000559556 EPGNQ6UW88 154 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 C12orf54Q6X4T0 127 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 RANBP3LQ86VV4 465 aaPredicted RBP11.22□□□□□ -0.61
TPM1-220ENST00000559556 FUNDC1Q8IVP5 155 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 OR5J2Q8NH18 312 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 OR51F2Q8NH61 342 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 RNF217Q8TC41 542 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 SPDL1Q96EA4 605 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 ZNF607Q96SK3 696 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 WFDC6Q9BQY6 131 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 ZNF416Q9BWM5 594 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 IKZF5Q9H5V7 419 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 OCEL1Q9H607 264 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 NARFLQ9H6Q4 476 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 METTL17Q9H7H0 456 aaPredicted RBP11.22□□□□□ -0.61
TPM1-220ENST00000559556 SLC52A3Q9NQ40 469 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 VAPAQ9P0L0 249 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 ZNF346Q9UL40 294 aaKnown RBP11.22□□□□□ -0.61
TPM1-220ENST00000559556 FZR1Q9UM11 496 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 CORO2BQ9UQ03 480 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 GRIP1Q9Y3R0 1128 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 USH1CQ9Y6N9 552 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 FMO6PO60774 539 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 ADORA3P0DMS8 318 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 GAAP10253 952 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 GPX2P18283 190 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 SLC6A2P23975 617 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 LSP1P33241 339 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 BIDP55957 195 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 LMO4P61968 165 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 PAGE3Q5JUK9 113 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 LINC00114Q6XXX2 140 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 ARMC8Q8IUR7 673 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 SKA3Q8IX90 412 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 OR6X1Q8NH79 312 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 TMEM54Q969K7 222 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 LRRC37BQ96QE4 947 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 TCF7L2Q9NQB0 619 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 NKIRAS1Q9NYS0 192 aa11.21□□□□□ -0.61
TPM1-220ENST00000559556 IGLV3-9A0A075B6K5 115 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 TRAV20A0A0B4J274 112 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 A0A1W2PPW3 197 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 C11orf98E9PRG8 122 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 POLR3GO15318 223 aaPredicted RBP11.2□□□□□ -0.62
TPM1-220ENST00000559556 PPIHO43447 177 aaKnown RBP11.2□□□□□ -0.62
TPM1-220ENST00000559556 CHP2O43745 196 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 ENTPD5O75356 428 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 SERPINB7O75635 380 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 SERPINI2O75830 405 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 MFN2O95140 757 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 SNAP29O95721 258 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 PNPP00491 289 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 NAT2P11245 290 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 ZNF250P15622 560 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 AHCYP23526 432 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 AQP1P29972 269 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 COMPP49747 757 aaPredicted RBP11.2□□□□□ -0.62
TPM1-220ENST00000559556 PCBP3P57721 371 aaKnown RBP11.2□□□□□ -0.62
TPM1-220ENST00000559556 ZP4Q12836 540 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 MMEL1Q495T6 779 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 RGS7BPQ6MZT1 257 aaPredicted RBP11.2□□□□□ -0.62
TPM1-220ENST00000559556 ZNF613Q6PF04 617 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 SHQ1Q6PI26 577 aaKnown RBP11.2□□□□□ -0.62
TPM1-220ENST00000559556 WDR88Q6ZMY6 472 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 SLC35D2Q76EJ3 337 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 SLC22A24Q8N4F4 322 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 C10orf53Q8N6V4 93 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 HIPK4Q8NE63 616 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 FGFBP3Q8TAT2 258 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 TLCD1Q96CP7 247 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 PLA2G12AQ9BZM1 189 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 C1orf198Q9H425 327 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 LPAR2Q9HBW0 351 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 TMEM38BQ9NVV0 291 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 TREM2Q9NZC2 230 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 GLTPQ9NZD2 209 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 CCDC167Q9P0B6 97 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 DUSP13Q9UII6 198 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 SLC13A4Q9UKG4 626 aa11.2□□□□□ -0.62
TPM1-220ENST00000559556 SLC22A23A1A5C7 686 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 C17orf100A8MU93 164 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 EVPLLA8MZ36 301 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 ERLIN1O75477 346 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 TGDSO95455 350 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 PATE4P0C8F1 98 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 PGA4P0DJD7 388 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 PGA3P0DJD8 388 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 OR8G3PP0DMU2 310 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 KLF3P57682 345 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms