RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 MT-ND1P03886 318 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 ASAH2BP0C7U1 165 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 GIPRP48546 466 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 GSK3BP49841 420 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 NUDT2P50583 147 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 RPL18Q07020 188 aaKnown RBP10.85□□□□□ -0.67
SMAD3-208ENST00000558827 ZP4Q12836 540 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 RAB39AQ14964 217 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 ADIPOQQ15848 244 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 LRFN4Q6PJG9 635 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 CLEC2AQ6UVW9 174 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 SPATA21Q7Z572 469 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 IGFN1Q86VF2 1251 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 SKA3Q8IX90 412 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 SVOPLQ8N434 492 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 ANKK1Q8NFD2 765 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 TMEM54Q969K7 222 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 BOD1Q96IK1 185 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 SORCS2Q96PQ0 1159 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 FOXB1Q99853 325 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 ZNF426Q9BUY5 554 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 KATNB1Q9BVA0 655 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 GRIP2Q9C0E4 1043 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 PCDHAC1Q9H158 963 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 OR51B6Q9H340 312 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 YAE1D1Q9NRH1 226 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 CRNNQ9UBG3 495 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-208ENST00000558827 ZNF229Q9UJW7 825 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 FZR1Q9UM11 496 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 MCIDASD6RGH6 385 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 hCG_2039718K7EN88 272 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 IGKV3-15P01624 115 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 QDPRP09417 244 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 IFI30P13284 250 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 CCL2P13500 99 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 HOXB1P14653 301 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-208ENST00000558827 ARR3P36575 388 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 CLRN1P58418 232 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 SNRPD2P62316 118 aaKnown RBP10.84□□□□□ -0.67
SMAD3-208ENST00000558827 RAB1AP62820 205 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 SELENOWP63302 87 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 PPP2R2BQ00005 443 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 SNTB2Q13425 540 aaKnown RBP10.84□□□□□ -0.67
SMAD3-208ENST00000558827 TOP3AQ13472 1001 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-208ENST00000558827 ETFDHQ16134 617 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 SWI5Q1ZZU3 235 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 GSG1Q2KHT4 349 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 DNM1P46Q6ZS02 220 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 RNF148Q8N7C7 305 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 OR6X1Q8NH79 312 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 ZNF566Q969W8 418 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 LRR1Q96L50 414 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 EFCAB1Q9HAE3 211 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 MRGBPQ9NV56 204 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 B3GNT2Q9NY97 397 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 ZNF224Q9NZL3 707 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 EGFL7Q9UHF1 273 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 A4GNTQ9UNA3 340 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 MED31Q9Y3C7 131 aa10.84□□□□□ -0.67
SMAD3-208ENST00000558827 A0A1W2PRG6 482 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 SLC22A2O15244 555 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 DHHO43323 396 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 TRMUO75648 421 aaKnown RBP10.83□□□□□ -0.68
SMAD3-208ENST00000558827 SERPINA1P01009 418 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 MAKP20794 623 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 DRD4P21917 467 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 CDAP32320 146 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 EFNA4P52798 201 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 PSME3P61289 254 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 DAG1Q14118 895 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 MSMPQ1L6U9 139 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 TBPL2Q6SJ96 375 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 FKBP9P1Q75LS8 142 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 LRRC18Q8N456 261 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 CLDN22Q8N7P3 220 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 OR10H5Q8NGA6 315 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 OR4F15Q8NGB8 312 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 OR4K5Q8NGD3 323 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 OR51A7Q8NH64 312 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 LZICQ8WZA0 190 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 FAM168AQ92567 244 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 NSMAFQ92636 917 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 MCHR2Q969V1 340 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 FAM162AQ96A26 154 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 SLC25A44Q96H78 314 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-208ENST00000558827 HSH2DQ96JZ2 352 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 FNDC11Q9BVV2 318 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 SLC19A3Q9BZV2 496 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 RNF121Q9H920 327 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 INIPQ9NRY2 104 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 V9GYQ6 96 aa10.83□□□□□ -0.68
SMAD3-208ENST00000558827 TRAV27A0A087WT01 109 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 TMEM129A0AVI4 362 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 H7C417 338 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 FFAR1O14842 300 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 SLC2A10O95528 541 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 RAB36O95755 333 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 TP53P04637 393 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-208ENST00000558827 PGA4P0DJD7 388 aa10.82□□□□□ -0.68
SMAD3-208ENST00000558827 PGA3P0DJD8 388 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms