RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 UBE2J2Q8N2K1 259 aa13.63□□□□□ -0.23
LINC01220-201ENST00000558575 OR9Q2Q8NGE9 314 aa13.63□□□□□ -0.23
LINC01220-201ENST00000558575 ZNF837Q96EG3 531 aaPredicted RBP13.63□□□□□ -0.23
LINC01220-201ENST00000558575 LINC00470Q9BZP3 86 aa13.63□□□□□ -0.23
LINC01220-201ENST00000558575 REEP1Q9H902 201 aa13.63□□□□□ -0.23
LINC01220-201ENST00000558575 INIPQ9NRY2 104 aa13.63□□□□□ -0.23
LINC01220-201ENST00000558575 GPR52Q9Y2T5 361 aa13.63□□□□□ -0.23
LINC01220-201ENST00000558575 SAMHD1Q9Y3Z3 626 aaKnown RBP13.63□□□□□ -0.23
LINC01220-201ENST00000558575 TUBAL3A6NHL2 446 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 UNC119BA6NIH7 251 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 CLOCKO15516 846 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 CIB2O75838 187 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 LYZL6O75951 148 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 THBDP07204 575 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 HOXB6P17509 224 aaKnown RBP13.62□□□□□ -0.23
LINC01220-201ENST00000558575 KIR2DL3P43628 341 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 BIDP55957 195 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 MELKQ14680 651 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 KPNB1Q14974 876 aaKnown RBP13.62□□□□□ -0.23
LINC01220-201ENST00000558575 ACKR1Q16570 336 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 MICAQ29983 383 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 ANKDD1AQ495B1 522 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 ALG10Q5BKT4 473 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 ARMC4Q5T2S8 1044 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 CARD17Q5XLA6 110 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 POMGNT2Q8NAT1 580 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 OR6X1Q8NH79 312 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 ASB10Q8WXI3 467 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 RSRC1Q96IZ7 334 aaKnown RBP13.62□□□□□ -0.23
LINC01220-201ENST00000558575 DENND2DQ9H6A0 471 aaPredicted RBP13.62□□□□□ -0.23
LINC01220-201ENST00000558575 ARMC1Q9NVT9 282 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 ASB6Q9NWX5 421 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 DNAJB9Q9UBS3 223 aa13.62□□□□□ -0.23
LINC01220-201ENST00000558575 ZNF346Q9UL40 294 aaKnown RBP13.62□□□□□ -0.23
LINC01220-201ENST00000558575 ZNF726A6NNF4 738 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 MCIDASD6RGH6 385 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 RPL36A-HNRNPH2H7BZ11 118 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 SLC43A1O75387 559 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 CCNB2O95067 398 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 BCL10O95999 233 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 FPR3P25089 353 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 CTXN1P60606 82 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 KEAP1Q14145 624 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 C9orf135Q5VTT2 229 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 LRFN4Q6PJG9 635 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 BHLHA15Q7RTS1 189 aaPredicted RBP13.61□□□□□ -0.23
LINC01220-201ENST00000558575 HS3ST5Q8IZT8 346 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 GNPDA2Q8TDQ7 276 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 TMEM54Q969K7 222 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 S100PBPQ96BU1 408 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 LRR1Q96L50 414 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 MUS81Q96NY9 551 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 HDHD5Q9BXW7 423 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 MRPL13Q9BYD1 178 aaKnown RBP13.61□□□□□ -0.23
LINC01220-201ENST00000558575 ACTR6Q9GZN1 396 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 TXNIPQ9H3M7 391 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 UPB1Q9UBR1 384 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 AP4S1Q9Y587 144 aa13.61□□□□□ -0.23
LINC01220-201ENST00000558575 MAGED1Q9Y5V3 778 aaPredicted RBP13.61□□□□□ -0.23
LINC01220-201ENST00000558575 CUBNO60494 3623 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 NPIPB13A6NJU9 1138 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 NPIPB4C9JG80 1138 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 M0R3G1 203 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 IGHMP01871 453 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 TP53P04637 393 aaPredicted RBP13.6□□□□□ -0.23
LINC01220-201ENST00000558575 EPXP11678 715 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 PRKACGP22612 351 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 MPGP29372 298 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 PRPS1P60891 318 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 ERVK-25P63136 954 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 NKX6-1P78426 367 aaPredicted RBP13.6□□□□□ -0.23
LINC01220-201ENST00000558575 TSPAN31Q12999 210 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 GABRA6Q16445 453 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 ZSCAN26Q16670 478 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 HIST3H3Q16695 136 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 HMBOX1Q6NT76 420 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 LINC00471Q8N535 108 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 AQP11Q8NBQ7 271 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 FAM222BQ8WU58 562 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 HDAC2Q92769 488 aaKnown RBP13.6□□□□□ -0.23
LINC01220-201ENST00000558575 KISS1RQ969F8 398 aaPredicted RBP13.6□□□□□ -0.23
LINC01220-201ENST00000558575 NMD3Q96D46 503 aaKnown RBP13.6□□□□□ -0.23
LINC01220-201ENST00000558575 SLC25A44Q96H78 314 aaPredicted RBP13.6□□□□□ -0.23
LINC01220-201ENST00000558575 ADAD1Q96M93 576 aaKnown RBP13.6□□□□□ -0.23
LINC01220-201ENST00000558575 DACH2Q96NX9 599 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 ALKBH3Q96Q83 286 aaPredicted RBP13.6□□□□□ -0.23
LINC01220-201ENST00000558575 TSPAN32Q96QS1 320 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 OR10A4Q9H209 315 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 YY1AP1Q9H869 796 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 GPR35Q9HC97 309 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 TAS2R16Q9NYV7 291 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 IL20RAQ9UHF4 553 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 ADAM18Q9Y3Q7 739 aa13.6□□□□□ -0.23
LINC01220-201ENST00000558575 A0A1W2PRG6 482 aa13.59□□□□□ -0.23
LINC01220-201ENST00000558575 SH3D21A4FU49 640 aa13.59□□□□□ -0.23
LINC01220-201ENST00000558575 OR6C65A6NJZ3 312 aa13.59□□□□□ -0.23
LINC01220-201ENST00000558575 H3BNX3 289 aa13.59□□□□□ -0.23
LINC01220-201ENST00000558575 H7C1Q1 480 aa13.59□□□□□ -0.23
LINC01220-201ENST00000558575 GNGT2O14610 69 aa13.59□□□□□ -0.23
LINC01220-201ENST00000558575 AKAP8O43823 692 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms