RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 SGCZQ96LD1 299 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 TSPAN32Q96QS1 320 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 GFM1Q96RP9 751 aaKnown RBP6.59□□□□□ -1.35
VPS13C-206ENST00000558338 NUDT9Q9BW91 350 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 RANBP3Q9H6Z4 567 aaPredicted RBP6.59□□□□□ -1.35
VPS13C-206ENST00000558338 C5orf42Q9H799 3197 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 KLHL9Q9P2J3 617 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 IKZF2Q9UKS7 526 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 CA14Q9ULX7 337 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 ING4Q9UNL4 249 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 FKBP7Q9Y680 259 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 TP53BP1Q12888 1972 aaPredicted RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 TMEM265A0A087WTH1 108 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 A0A1B0GVI7 797 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 TMEM72A0PK05 275 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 TOX3O15405 576 aaPredicted RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 OR2T1O43869 369 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 UPK3AO75631 287 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 KRT33AO76009 404 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 ZFPL1O95159 310 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 OR6A2O95222 327 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 AHSA1O95433 338 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 NUDT14O95848 222 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 ABHD16AO95870 558 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 F13BP05160 661 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 OR8G3PP0DMU2 310 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 ANXA3P12429 323 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 RAC2P15153 192 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 POU3F2P20265 443 aaPredicted RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 MST1P26927 711 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 EVI2BP34910 448 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 RCVRNP35243 200 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 NR0B1P51843 470 aaKnown RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 AGFG1P52594 562 aaKnown RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 SUMO3P55854 103 aaPredicted RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 OR1D5P58170 312 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 DGCR2P98153 550 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 KLF9Q13886 244 aaPredicted RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 KCNAB1Q14722 419 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 MFSD13AQ14CX5 517 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 NSDHLQ15738 373 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 BCL2L15Q5TBC7 163 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 LIPNQ5VXI9 398 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 NKAIN2Q5VXU1 208 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 FDX2Q6P4F2 183 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 WDR74Q6RFH5 385 aaPredicted RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 APOOLQ6UXV4 268 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 ZNF767PQ75MW2 155 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 LINGO2Q7L985 606 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 GRINAQ7Z429 371 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 SIAH3Q8IW03 269 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 C9orf40Q8IXQ3 194 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 DEFB119Q8N690 84 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 ZNF321PQ8N8H1 164 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 PLPP5Q8NEB5 264 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 OR6N2Q8NGY6 317 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 OR56B4Q8NH76 319 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 OR1L3Q8NH93 324 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 GPR148Q8TDV2 347 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 ZNRF4Q8WWF5 429 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 METTL21AQ8WXB1 218 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 TMEM234Q8WY98 164 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 TAAR8Q969N4 342 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 KTI12Q96EK9 354 aaPredicted RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 S100A16Q96FQ6 103 aaKnown RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 ZFP3Q96NJ6 502 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 CACNG6Q9BXT2 260 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 BEX2Q9BXY8 128 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 UBE2ZQ9H832 354 aaPredicted RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 TMEM165Q9HC07 324 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 GALNT9Q9HCQ5 603 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 NUDT15Q9NV35 164 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 C2orf42Q9NWW7 574 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 UCKL1Q9NWZ5 548 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 MRM2Q9UI43 246 aaKnown RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 ZNF346Q9UL40 294 aaKnown RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 HEATR5AQ86XA9 2040 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 A0A0A6YYJ9 748 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 A0A1W2PPK0 400 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 TRABD2BA6NFA1 517 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 ACOD1A6NK06 481 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 ANXA2P2A6NMY6 339 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 TTLL8A6PVC2 850 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 A8MVM7 634 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 PIN1P1O15428 100 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 MAGEB4O15481 346 aaPredicted RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 SUSD5O60279 629 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 SDC3O75056 442 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 ANXA2P07355 339 aaKnown RBP6.58□□□□□ -1.36
VPS13C-206ENST00000558338 CD3GP09693 182 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 H2AFB2P0C5Z0 115 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 TFPIP10646 304 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 ALOX5APP20292 161 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 MAOBP27338 520 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 DPP4P27487 766 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 CFPP27918 469 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 ABCD3P28288 659 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 GRPRP30550 384 aa6.58□□□□□ -1.36
VPS13C-206ENST00000558338 GDNFP39905 211 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms