RNA–Protein interactions for RNA: ENST00000557958.1

LDLR-206, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 1,881 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-206ENST00000557958 SELENBP1Q13228 472 aa15.16■□□□□ 0.02
LDLR-206ENST00000557958 DDI2Q5TDH0 399 aa15.16■□□□□ 0.02
LDLR-206ENST00000557958 SLC22A10Q63ZE4 541 aa15.16■□□□□ 0.02
LDLR-206ENST00000557958 PAQR8Q8TEZ7 354 aa15.16■□□□□ 0.02
LDLR-206ENST00000557958 SMAP2Q8WU79 429 aaPredicted RBP15.16■□□□□ 0.02
LDLR-206ENST00000557958 ZNRF4Q8WWF5 429 aa15.16■□□□□ 0.02
LDLR-206ENST00000557958 SMIM19Q96E16 107 aa15.16■□□□□ 0.02
LDLR-206ENST00000557958 KLHL15Q96M94 604 aa15.16■□□□□ 0.02
LDLR-206ENST00000557958 C5orf34Q96MH7 638 aa15.16■□□□□ 0.02
LDLR-206ENST00000557958 TSSK2Q96PF2 358 aa15.16■□□□□ 0.02
LDLR-206ENST00000557958 ANGPTL4Q9BY76 406 aa15.16■□□□□ 0.02
LDLR-206ENST00000557958 ASCL3Q9NQ33 180 aa15.16■□□□□ 0.02
LDLR-206ENST00000557958 P4HTMQ9NXG6 502 aa15.16■□□□□ 0.02
LDLR-206ENST00000557958 VSX1Q9NZR4 365 aaPredicted RBP15.16■□□□□ 0.02
LDLR-206ENST00000557958 NPIPA1Q9UND3 350 aa15.16■□□□□ 0.02
LDLR-206ENST00000557958 CMAHPQ9Y471 501 aa15.16■□□□□ 0.02
LDLR-206ENST00000557958 LIPT2A6NK58 231 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 H3BML4 177 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 OGG1O15527 345 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 MYL9P24844 172 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 HCCSP53701 268 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 CHAF1BQ13112 559 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 CDK5R1Q15078 307 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 ZNF181Q2M3W8 571 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 PRAMEF20Q5VT98 475 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 DNM1P34Q6PK57 102 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 BTLAQ7Z6A9 289 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 CCDC190Q86UF4 302 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 PM20D2Q8IYS1 436 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 OR6V1Q8N148 313 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 PARP16Q8N5Y8 322 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 KIAA1143Q96AT1 154 aaPredicted RBP15.15■□□□□ 0.02
LDLR-206ENST00000557958 PELI1Q96FA3 418 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 ARL5BQ96KC2 179 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 WDFY2Q96P53 400 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 INTS14Q96SY0 518 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 B3GNT4Q9C0J1 378 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 LAMP5Q9UJQ1 280 aa15.15■□□□□ 0.02
LDLR-206ENST00000557958 SIRT4Q9Y6E7 314 aaPredicted RBP15.15■□□□□ 0.02
LDLR-206ENST00000557958 ISPDA4D126 451 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 FAM171A2A8MVW0 826 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 B4DXG7 233 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 E9PI62 339 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 LRRTM2O43300 516 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 GPRIN2O60269 458 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 SPINK2P20155 84 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 TGM4P49221 684 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 TMEM91Q6ZNR0 172 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 VASH2Q86V25 355 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 TIGD4Q8IY51 512 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 WDSUB1Q8N9V3 476 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 ZNF511Q8NB15 262 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 SYT14Q8NB59 555 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 ADPRHL1Q8NDY3 354 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 WDR76Q9H967 626 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 SACM1LQ9NTJ5 587 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 ST6GALNAC2Q9UJ37 374 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 FBXL2Q9UKC9 423 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 COPS3Q9UNS2 423 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 HSPB2A8KAH6 182 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 CENPBD1B2RD01 187 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 CTDSP2O14595 271 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 FZD7O75084 574 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 UPK1BO75841 260 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 SNX4O95219 450 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 EDNRAP25101 427 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 CD82P27701 267 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 GDI2P50395 445 aaKnown RBP15.14■□□□□ 0.01
LDLR-206ENST00000557958 HSPB2Q16082 182 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 MZT2AQ6P582 158 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 HDDC2Q7Z4H3 204 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 PXKQ7Z7A4 578 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 TPRA1Q86W33 373 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 CDC20BQ86Y33 519 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 RFLNBQ8N5W9 214 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 OR6N2Q8NGY6 317 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 GHSRQ92847 366 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 PGLYRP3Q96LB9 341 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 ADAD1Q96M93 576 aaKnown RBP15.14■□□□□ 0.01
LDLR-206ENST00000557958 TTTY10Q9BZA0 68 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 MARCH7Q9H992 704 aa15.14■□□□□ 0.01
LDLR-206ENST00000557958 GVINP1Q7Z2Y8 2422 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 TRBV2A0A0J9YWF9 115 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 A0A1W2PNV4 684 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 TRABD2BA6NFA1 517 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 SEC14L5O43304 696 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 HLA-DQA2P01906 255 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 SERPINA7P05543 415 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 KRT8P05787 483 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 CLEC2LP0C7M8 214 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 TNFSF8P32971 234 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 EGR3Q06889 387 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 MYBPHQ13203 477 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 AGAP7PQ5VUJ5 663 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 RPTNQ6XPR3 784 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 RAB43Q86YS6 212 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 ABHD4Q8TB40 342 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 POC1BQ8TC44 478 aa15.13■□□□□ 0.01
LDLR-206ENST00000557958 DCLRE1CQ96SD1 692 aaKnown RBP15.13■□□□□ 0.01
LDLR-206ENST00000557958 NPAS1Q99742 590 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms