RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 RAD21L1Q9H4I0 556 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 ZNF385DQ9H6B1 395 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 RMND5AQ9H871 391 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 EVA1AQ9H8M9 152 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 SEC61A2Q9H9S3 476 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 TPT1P8Q9HAU6 139 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 B3GAT2Q9NPZ5 323 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 RPS6KB2Q9UBS0 482 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 GRIP1Q9Y3R0 1128 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 CHST2Q9Y4C5 530 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 WNK2Q9Y3S1 2297 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 DYSFO75923 2080 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 TRAV36DV7A0A075B6V5 113 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 TRAV20A0A0B4J274 112 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 M0R233 179 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 HDAC3O15379 428 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 RGS16O15492 202 aaPredicted RBP7.44□□□□□ -1.22
VRK1-206ENST00000557222 TRAF3IP2O43734 574 aaPredicted RBP7.44□□□□□ -1.22
VRK1-206ENST00000557222 ANP32DO95626 131 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 BCHEP06276 602 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 CELA3BP08861 270 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 ETFAP13804 333 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 ANPEPP15144 967 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 ZNF14P17017 642 aaPredicted RBP7.44□□□□□ -1.22
VRK1-206ENST00000557222 PRKAR1BP31321 381 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 GPR6P46095 362 aaPredicted RBP7.44□□□□□ -1.22
VRK1-206ENST00000557222 NME5P56597 212 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 IL1RL1Q01638 556 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 NPRL3Q12980 569 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 FADDQ13158 208 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 TRIP10Q15642 601 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 FXNQ16595 210 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 GSG1Q2KHT4 349 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 TRMT5Q32P41 509 aaKnown RBP7.44□□□□□ -1.22
VRK1-206ENST00000557222 ELFN2Q5R3F8 820 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 FAM91A1Q658Y4 838 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 SERPINA11Q86U17 422 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 MYPOPQ86VE0 399 aaPredicted RBP7.44□□□□□ -1.22
VRK1-206ENST00000557222 UEVLDQ8IX04 471 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 ZCCHC24Q8N2G6 241 aaKnown RBP7.44□□□□□ -1.22
VRK1-206ENST00000557222 KDM8Q8N371 416 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 MREGQ8N565 214 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 SCAIQ8N9R8 606 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 SEMA6DQ8NFY4 1073 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 SGMS2Q8NHU3 365 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 BBS10Q8TAM1 723 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 PNPT1Q8TCS8 783 aaKnown RBP7.44□□□□□ -1.22
VRK1-206ENST00000557222 ZNF418Q8TF45 676 aaPredicted RBP7.44□□□□□ -1.22
VRK1-206ENST00000557222 FAM216AQ8WUB2 273 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 TAAR8Q969N4 342 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 TMEM186Q96B77 213 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 KTI12Q96EK9 354 aaPredicted RBP7.44□□□□□ -1.22
VRK1-206ENST00000557222 SLC41A3Q96GZ6 507 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 TMEM19Q96HH6 336 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 ITCHQ96J02 903 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 ZNF75AQ96N20 296 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 JMJD8Q96S16 334 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 EPYCQ99645 322 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 ZNF416Q9BWM5 594 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 MRPL37Q9BZE1 423 aaKnown RBP7.44□□□□□ -1.22
VRK1-206ENST00000557222 A4GALTQ9NPC4 353 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 PNPOQ9NVS9 261 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 THAP1Q9NVV9 213 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 HIF1ANQ9NWT6 349 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 ZIM2Q9NZV7 527 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 ZNF346Q9UL40 294 aaKnown RBP7.44□□□□□ -1.22
VRK1-206ENST00000557222 NOX1Q9Y5S8 564 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 TRRAPQ9Y4A5 3859 aa7.44□□□□□ -1.22
VRK1-206ENST00000557222 SLC22A23A1A5C7 686 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 SH3PXD2BA1X283 911 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 TMEM89A2RUT3 159 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 MS4A18H0YCH9 400 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 SPRY1O43609 319 aaPredicted RBP7.43□□□□□ -1.22
VRK1-206ENST00000557222 UBL3O95164 117 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 VENTXO95231 258 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 MSMBP08118 114 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 SAGP10523 405 aaPredicted RBP7.43□□□□□ -1.22
VRK1-206ENST00000557222 BGNP21810 368 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 GRPRP30550 384 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 LSP1P33241 339 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 CAPZA2P47755 286 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 LIMS1P48059 325 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 ARFIP2P53365 341 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 VSNL1P62760 191 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 BST1Q10588 318 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 RGNQ15493 299 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 MS4A18Q3C1V0 323 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 KRT71Q3SY84 523 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 TNFAIP8L3Q5GJ75 292 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 ATG16L1Q676U5 607 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 KRT80Q6KB66 452 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 WDR93Q6P2C0 686 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 ULK3Q6PHR2 472 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 DHRS4L2Q6PKH6 230 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 NHLRC1Q6VVB1 395 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 PIWIL3Q7Z3Z3 882 aaKnown RBP7.43□□□□□ -1.22
VRK1-206ENST00000557222 DPPA2Q7Z7J5 298 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 CROCCP2Q86T23 111 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.43□□□□□ -1.22
VRK1-206ENST00000557222 OR51F2Q8NH61 342 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms