RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ITPR1Q14643 2758 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 COL4A2P08572 1712 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 CEP250Q9BV73 2442 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 FAM186AA6NE01 2351 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 DENND4AQ7Z401 1863 aa4.03□□□□□ -1.77
SRP54-212ENST00000556992 TICRRQ7Z2Z1 1910 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 TRAV36DV7A0A075B6V5 113 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 SAGE2PA6NJ88 616 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 LINC01548A6NM66 108 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 C9J4A7 227 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 FLRT2O43155 660 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 OR2T1O43869 369 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 PRKNO60260 465 aaPredicted RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 PIP5K1CO60331 668 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 CDC40O60508 579 aaKnown RBP eCLIP4.02□□□□□ -1.77
SRP54-212ENST00000556992 ICOSLGO75144 302 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 OR7A10O76100 309 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 AGFG2O95081 481 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 NADKO95544 446 aaPredicted RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 NTN1O95631 604 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 CH25HO95992 272 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 MT-ATP6P00846 226 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 TSPAN19P0C672 248 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 ICAM2P13598 275 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 APEHP13798 732 aaKnown RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 CPEP16870 476 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 ZNF3P17036 446 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 CD53P19397 219 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 GADD45AP24522 165 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 FKBP2P26885 142 aaKnown RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 CALRP27797 417 aaKnown RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 ABCD3P28288 659 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 TACR3P29371 465 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 CCKBRP32239 447 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 SOX6P35712 828 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 RPL4P36578 427 aaKnown RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 TGFBR2P37173 567 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 ETV5P41161 510 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 TMED10P49755 219 aaKnown RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 DIO1P49895 249 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 ETV1P50549 477 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 P2RX1P51575 399 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 BMXP51813 675 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 POLR2HP52434 150 aaKnown RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 SUMO3P55854 103 aaPredicted RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 WNT4P56705 351 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 VBP1P61758 197 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 LSM3P62310 102 aaKnown RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 SSBP2P81877 361 aaPredicted RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 ACSM1Q08AH1 577 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 MLLT11Q13015 90 aaPredicted RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 GPR50Q13585 617 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 TPBGQ13641 420 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 IL10RAQ13651 578 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 CBFBQ13951 182 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 ZNF846Q147U1 533 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 ANGPT1Q15389 498 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 EXT1Q16394 746 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 TSTQ16762 297 aaKnown RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 DCAF12Q5T6F0 453 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 FAAH2Q6GMR7 532 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 PLBD1Q6P4A8 553 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 ARHGAP11AQ6P4F7 1023 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 C5orf46Q6UWT4 87 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 APOOLQ6UXV4 268 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 ZNF66Q6ZN08 573 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 SHISA6Q6ZSJ9 500 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 BCDIN3DQ7Z5W3 292 aaKnown RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 ACBD7Q8N6N7 88 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 TMCO5AQ8N6Q1 288 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 BMPERQ8N8U9 685 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 SLC37A3Q8NCC5 494 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 OR13C2Q8NGS9 318 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 OR6S1Q8NH40 331 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 OR52N1Q8NH53 320 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 B4GALNT2Q8NHY0 566 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 DYNC2LI1Q8TCX1 351 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 DUSP19Q8WTR2 217 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 TMEM234Q8WY98 164 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 ATOH1Q92858 354 aaPredicted RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 MR1Q95460 341 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 BORCS5Q969J3 196 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 OTULINQ96BN8 352 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 C3orf49Q96BT1 292 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 ARSGQ96EG1 525 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 MRPL48Q96GC5 212 aaKnown RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 DACH2Q96NX9 599 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 ERMAPQ96PL5 475 aaPredicted RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 OR5M11Q96RB7 305 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 COQ7Q99807 217 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 CTRCQ99895 268 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 SH3GL3Q99963 347 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 CRB3Q9BUF7 120 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 DEFB126Q9BYW3 111 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 DCSTAMPQ9H295 470 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 ARRDC1-AS1Q9H2J1 176 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 MCCC2Q9HCC0 563 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 HMG20AQ9NP66 347 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 PALMDQ9NP74 551 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 NRIP3Q9NQ35 241 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms