RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 BCL2L14Q9BZR8 327 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 SLC19A3Q9BZV2 496 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 PPA2Q9H2U2 334 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 CTPS2Q9NRF8 586 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 DUSP22Q9NRW4 184 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 TMEM106BQ9NUM4 274 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 GIN1Q9NXP7 522 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 FAM53CQ9NYF3 392 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 TXNDC16Q9P2K2 825 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 ZDHHC8Q9ULC8 765 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 SIGLEC9Q9Y336 463 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 REXO2Q9Y3B8 237 aaKnown RBP4.75□□□□□ -1.65
ATXN3-245ENST00000556958 PSAT1Q9Y617 370 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 A0A0U1RQK1 487 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF503-AS2A6NEH8 195 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF99A8MXY4 864 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-245ENST00000556958 TM9SF1O15321 606 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF208O43345 1280 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 ENSAO43768 121 aaKnown RBP4.74□□□□□ -1.65
ATXN3-245ENST00000556958 NPHS1O60500 1241 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 RAMP3O60896 148 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 ENTPD5O75356 428 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 SLC43A1O75387 559 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 URI1O94763 535 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-245ENST00000556958 WISP3O95389 354 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-245ENST00000556958 CSTAP01040 98 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 PDYNP01213 254 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 IGHV1-46P01743 117 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 IGHV3-13P01766 116 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 THY1P04216 161 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 SERPINA5P05154 406 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 ADH4P08319 380 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 ANXA4P09525 319 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-245ENST00000556958 ACP2P11117 423 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 RPS2P15880 293 aaKnown RBP4.74□□□□□ -1.65
ATXN3-245ENST00000556958 TNFRSF1AP19438 455 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 RAB1AP62820 205 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 DGCR2P98153 550 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 PIGFQ07326 219 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 RBBP4Q09028 425 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 CEACAM16Q2WEN9 425 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 NDUFAF6Q330K2 333 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 GGTA1PQ4G0N0 100 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 SPIN4Q56A73 249 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 ZMAT1Q5H9K5 638 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 NOXRED1Q6NXP6 359 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 SLC27A4Q6P1M0 643 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 TRMT10BQ6PF06 316 aaKnown RBP4.74□□□□□ -1.65
ATXN3-245ENST00000556958 CREB3L2Q70SY1 520 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 EIF3MQ7L2H7 374 aaKnown RBP4.74□□□□□ -1.65
ATXN3-245ENST00000556958 LINGO2Q7L985 606 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 SZRD1Q7Z422 152 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 SATL1Q86VE3 508 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 SNX32Q86XE0 403 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 KLBQ86Z14 1044 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 FITM2Q8N6M3 262 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 ZFP28Q8NHY6 868 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 KIF18AQ8NI77 898 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 C8orf46Q8TAG6 207 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 RHEBL1Q8TAI7 183 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 DACT3Q96B18 629 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-245ENST00000556958 DNAJA3Q96EY1 480 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 NEIL1Q96FI4 390 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-245ENST00000556958 CFAP36Q96G28 342 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 MS4A4EQ96PG1 132 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 TSPAN32Q96QS1 320 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 STACQ99469 402 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 RHOXF2Q9BQY4 288 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 OR11A1Q9GZK7 315 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 LRMDAQ9H2I8 198 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 RANBP3Q9H6Z4 567 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-245ENST00000556958 RNF121Q9H920 327 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 CAB39LQ9H9S4 337 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 GPR35Q9HC97 309 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 RAB18Q9NP72 206 aa4.74□□□□□ -1.65
ATXN3-245ENST00000556958 MTO1Q9Y2Z2 717 aaKnown RBP4.74□□□□□ -1.65
ATXN3-245ENST00000556958 CEACAM18A8MTB9 384 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF879B4DU55 563 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 IFNL4K9M1U5 179 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 OR7A17O14581 309 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 SLC25A17O43808 307 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 PSPNO60542 156 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 SCN2BO60939 215 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 PEX14O75381 377 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 AKR7A3O95154 331 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 PTHP01270 115 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 FGGP02679 453 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 CHRM2P08172 466 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 CD55P08174 381 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 CCDC159P0C7I6 412 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 CD28P10747 220 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 CCNA2P20248 432 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 TNFSF4P23510 183 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 CHATP28329 748 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 GTF2E2P29084 291 aaKnown RBP4.73□□□□□ -1.65
ATXN3-245ENST00000556958 CRABP2P29373 138 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 CFHR2P36980 270 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 UCP2P55851 309 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 TNFAIP6P98066 277 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-245ENST00000556958 SKP2Q13309 424 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms