RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 NPIPB13A6NJU9 1138 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 NPIPB4C9JG80 1138 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 C11orf98E9PRG8 122 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 NDUFAB1O14561 156 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 BCL10O95999 233 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 IGHG1P01857 330 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 TSPAN19P0C672 248 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 CD79AP11912 226 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 NPR2P20594 1047 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 NR4A1P22736 598 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 KDELR2P33947 212 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 CAPZA2P47755 286 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 IDH3GP51553 393 aaPredicted RBP10.92□□□□□ -0.66
SNX6-207ENST00000556303 TAS2R41P59536 307 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 SELENOWP63302 87 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 TUBA1BP68363 451 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 TUBA4AP68366 448 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 DAG1Q14118 895 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 TMEM249Q2WGJ8 235 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 TUBA1AQ71U36 451 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 SLC46A3Q7Z3Q1 461 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 TSPYL5Q86VY4 417 aaPredicted RBP10.92□□□□□ -0.66
SNX6-207ENST00000556303 MAPK1IP1LQ8NDC0 245 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 OR2T12Q8NG77 320 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 TMEM239Q8WW34 195 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 NEU4Q8WWR8 484 aaPredicted RBP10.92□□□□□ -0.66
SNX6-207ENST00000556303 LZICQ8WZA0 190 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 ZNF75AQ96N20 296 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 DOK1Q99704 481 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 HOPXQ9BPY8 73 aaPredicted RBP10.92□□□□□ -0.66
SNX6-207ENST00000556303 MEPEQ9NQ76 525 aaPredicted RBP10.92□□□□□ -0.66
SNX6-207ENST00000556303 ZNF446Q9NWS9 450 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 RIMS3Q9UJD0 308 aa10.92□□□□□ -0.66
SNX6-207ENST00000556303 YLPM1P49750 1951 aaKnown RBP10.92□□□□□ -0.66
SNX6-207ENST00000556303 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.91□□□□□ -0.666e-10■■■□□ 15.5
SNX6-207ENST00000556303 A0A1W2PRG6 482 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 ELOVL7A1L3X0 281 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 ZNF503-AS2A6NEH8 195 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 ATP8B1O43520 1251 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 CCDC22O60826 627 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 FARS2O95363 451 aaKnown RBP10.91□□□□□ -0.66
SNX6-207ENST00000556303 RAB36O95755 333 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 HLA-HP01893 362 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 CELA3BP08861 270 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 PGA4P0DJD7 388 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 PGA3P0DJD8 388 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 OR8G3PP0DMU2 310 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 UMPSP11172 480 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 ZNF35P13682 527 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 ZNF14P17017 642 aaPredicted RBP10.91□□□□□ -0.66
SNX6-207ENST00000556303 FUT1P19526 365 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 USF1P22415 310 aaPredicted RBP10.91□□□□□ -0.66
SNX6-207ENST00000556303 DAP3P51398 398 aaKnown RBP10.91□□□□□ -0.66
SNX6-207ENST00000556303 RPS23P62266 143 aaKnown RBP10.91□□□□□ -0.66
SNX6-207ENST00000556303 RAB1AP62820 205 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 GUCY1A3Q02108 690 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 ST3GAL3Q11203 375 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 NPRL3Q12980 569 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 TAF11Q15544 211 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 HIST3H3Q16695 136 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 NANOGNBQ7Z5D8 188 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 PRIMA1Q86XR5 153 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 HIPK1Q86Z02 1210 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 MICU2Q8IYU8 434 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 SGTBQ96EQ0 304 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 SORCS2Q96PQ0 1159 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 SEPHS2Q99611 448 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 PIMREGQ9BSJ6 248 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 C1orf198Q9H425 327 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 NOX3Q9HBY0 568 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 MED31Q9Y3C7 131 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 CMAHPQ9Y471 501 aa10.91□□□□□ -0.66
SNX6-207ENST00000556303 FBN1P35555 2871 aaKnown RBP10.91□□□□□ -0.66
SNX6-207ENST00000556303 SLC22A23A1A5C7 686 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 A8MV72 311 aaPredicted RBP10.9□□□□□ -0.66
SNX6-207ENST00000556303 VWC2LB2RUY7 222 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 BLOC1S5-TXNDC5H3BN57 136 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 hCG_2039718K7EN88 272 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 KPNA4O00629 521 aaPredicted RBP10.9□□□□□ -0.66
SNX6-207ENST00000556303 DHHO43323 396 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 SERPINI2O75830 405 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 OR7A10O76100 309 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 PTHP01270 115 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 SERPINA5P05154 406 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 NR2C1P13056 603 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 B4GALT1P15291 398 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 LSP1P33241 339 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 THBS4P35443 961 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 GLRXP35754 106 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 MDH1P40925 334 aaKnown RBP10.9□□□□□ -0.66
SNX6-207ENST00000556303 ZNF133P52736 654 aaPredicted RBP10.9□□□□□ -0.66
SNX6-207ENST00000556303 PIN1Q13526 163 aaPredicted RBP10.9□□□□□ -0.66
SNX6-207ENST00000556303 ANKDD1AQ495B1 522 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 CYBRD1Q53TN4 286 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 LRFN4Q6PJG9 635 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 VHLLQ6RSH7 139 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 DEF8Q6ZN54 512 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 MYPOPQ86VE0 399 aaPredicted RBP10.9□□□□□ -0.66
SNX6-207ENST00000556303 NKAIN4Q8IVV8 208 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 SLC22A24Q8N4F4 322 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms