RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 B9D1Q9UPM9 204 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 FRYQ5TBA9 3013 aa13.21□□□□□ -0.29
VPS33B-205ENST00000556096 PCSK5Q92824 1860 aa13.21□□□□□ -0.29
VPS33B-205ENST00000556096 SLC22A23A1A5C7 686 aa13.21□□□□□ -0.3
VPS33B-205ENST00000556096 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.21□□□□□ -0.3
VPS33B-205ENST00000556096 J3QRK9 145 aa13.21□□□□□ -0.3
VPS33B-205ENST00000556096 CBR3O75828 277 aa13.21□□□□□ -0.3
VPS33B-205ENST00000556096 P04436 131 aa13.21□□□□□ -0.3
VPS33B-205ENST00000556096 DPP4P27487 766 aa13.21□□□□□ -0.3
VPS33B-205ENST00000556096 RBMS1P29558 406 aaKnown RBP13.21□□□□□ -0.3
VPS33B-205ENST00000556096 S100A5P33763 92 aa13.21□□□□□ -0.3
VPS33B-205ENST00000556096 ZNF239Q16600 458 aaKnown RBP13.21□□□□□ -0.3
VPS33B-205ENST00000556096 CCDC58Q4VC31 144 aa13.21□□□□□ -0.3
VPS33B-205ENST00000556096 TP53I3Q53FA7 332 aa13.21□□□□□ -0.3
VPS33B-205ENST00000556096 ZNF684Q5T5D7 378 aa13.21□□□□□ -0.3
VPS33B-205ENST00000556096 B3GNTL1Q67FW5 361 aaPredicted RBP13.21□□□□□ -0.3
VPS33B-205ENST00000556096 LYPD4Q6UWN0 246 aa13.21□□□□□ -0.3
VPS33B-205ENST00000556096 TMEM91Q6ZNR0 172 aa13.21□□□□□ -0.3
VPS33B-205ENST00000556096 KCNN2Q9H2S1 579 aa13.21□□□□□ -0.3
VPS33B-205ENST00000556096 RERGLQ9H628 205 aa13.21□□□□□ -0.3
VPS33B-205ENST00000556096 TRAPPC4Q9Y296 219 aa13.21□□□□□ -0.3
VPS33B-205ENST00000556096 AHCTF1Q8WYP5 2266 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 CDRT15L2A8MXV6 281 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 TAF4O00268 1085 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 HLA-DOBP13765 273 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 CD82P27701 267 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 CRABP1P29762 137 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 SDC2P34741 201 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 SIRPAP78324 504 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 FOXK1P85037 733 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 ATP1A4Q13733 1029 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 RPL22L1Q6P5R6 122 aaKnown RBP13.2□□□□□ -0.3
VPS33B-205ENST00000556096 C16orf87Q6PH81 154 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 ARL9Q6T311 187 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 NHLRC1Q6VVB1 395 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 PLEKHG7Q6ZR37 379 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 MDGA2Q7Z553 956 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 MS4A15Q8N5U1 240 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 HAVCR2Q8TDQ0 301 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 ASB10Q8WXI3 467 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 KLHL15Q96M94 604 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 C5orf34Q96MH7 638 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 GNRHR2Q96P88 292 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 DCLRE1CQ96SD1 692 aaKnown RBP13.2□□□□□ -0.3
VPS33B-205ENST00000556096 WDR76Q9H967 626 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 ASCL3Q9NQ33 180 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 RPH3AQ9Y2J0 694 aaPredicted RBP13.2□□□□□ -0.3
VPS33B-205ENST00000556096 TMEM14AQ9Y6G1 99 aa13.2□□□□□ -0.3
VPS33B-205ENST00000556096 IGLV1-36A0A0B4J1U3 117 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 IQCMA0A1B0GVH7 501 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 NPIPA5E9PKD4 350 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 SEC14L5O43304 696 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 ZIC3O60481 467 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 AKR7A3O95154 331 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 ZNF17P17021 662 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 ETV6P41212 452 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 HSF1Q00613 529 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 RUNX1T1Q06455 604 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 SLC35D2Q76EJ3 337 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 KDM8Q8N371 416 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 OR5M1Q8NGP8 315 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 NKD1Q969G9 470 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 RELTQ969Z4 430 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 THOC3Q96J01 351 aaKnown RBP13.19□□□□□ -0.3
VPS33B-205ENST00000556096 PGLYRP3Q96LB9 341 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 ADAD1Q96M93 576 aaKnown RBP13.19□□□□□ -0.3
VPS33B-205ENST00000556096 INTS14Q96SY0 518 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 CELSR3Q9NYQ7 3312 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 GNG8Q9UK08 70 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 NPIPA1Q9UND3 350 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 MRPS18BQ9Y676 258 aaKnown RBP13.19□□□□□ -0.3
VPS33B-205ENST00000556096 CD8B2A6NJW9 211 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 CENPBD1B2RD01 187 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 C1QTNF9BB2RNN3 333 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 PHYHO14832 338 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 SLC16A7O60669 478 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 SC5DO75845 299 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 TACSTD2P09758 323 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 C1QTNF9P0C862 333 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 CD8BP10966 210 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 IFNGR1P15260 489 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 CD40LGP29965 261 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 TGM4P49221 684 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 CYB561P49447 251 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 P2RY4P51582 365 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 PPP5CP53041 499 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 OR2B6P58173 313 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 ZNF45Q02386 682 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 MRPL28Q13084 256 aaKnown RBP13.19□□□□□ -0.3
VPS33B-205ENST00000556096 MELKQ14680 651 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 RTP5Q14D33 572 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 CDK5R1Q15078 307 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 TMEM176BQ3YBM2 270 aaPredicted RBP13.19□□□□□ -0.3
VPS33B-205ENST00000556096 IGF2-ASQ6U949 168 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 BEST3Q8N1M1 668 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 SYT14Q8NB59 555 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 NEIL3Q8TAT5 605 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 ABHD4Q8TB40 342 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 MIB2Q96AX9 1013 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 SMIM19Q96E16 107 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms