RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 ASB10Q8WXI3 467 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 PYURFQ96I23 114 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 SLC38A2Q96QD8 506 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 GSX2Q9BZM3 304 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 CXorf56Q9H5V9 222 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 SEC61A2Q9H9S3 476 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 GLTPQ9NZD2 209 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 CRNNQ9UBG3 495 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-219ENST00000555563 POFUT2Q9Y2G5 429 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 FAM32AQ9Y421 112 aaKnown RBP11.96□□□□□ -0.49
SHMT2-219ENST00000555563 TRAV27A0A087WT01 109 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 A0A1W2PRQ8 180 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 NPIPB13A6NJU9 1138 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 EFCAB9A8MZ26 197 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 NPIPB4C9JG80 1138 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 E7EQL1 145 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 CDC42EP2O14613 210 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 PDE5AO76074 875 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 IGKV3-15P01624 115 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 IGLV1-44P01699 117 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 CELA3BP08861 270 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 CECR9P0C854 216 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 HOXB1P14653 301 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-219ENST00000555563 ATP6V1B2P21281 511 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 CAPZA2P47755 286 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 TOP3AQ13472 1001 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-219ENST00000555563 FHL1Q13642 323 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 DGCR6Q14129 220 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 LAPTM4AQ15012 233 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 IQCCQ4KMZ1 466 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 ALG10Q5BKT4 473 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 FGD3Q5JSP0 725 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 ARMC4Q5T2S8 1044 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 PODNL1Q6PEZ8 512 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 RINLQ6ZS11 566 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 ZNF627Q7L945 461 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 HDDC2Q7Z4H3 204 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 MDP1Q86V88 176 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 MYPOPQ86VE0 399 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-219ENST00000555563 IGFN1Q86VF2 1251 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 RNF113BQ8IZP6 322 aaKnown RBP11.95□□□□□ -0.5
SHMT2-219ENST00000555563 OR51A7Q8NH64 312 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 BCAS4Q8TDM0 211 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 DHRS1Q96LJ7 313 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 SEPHS2Q99611 448 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 FOXB1Q99853 325 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 MRPL13Q9BYD1 178 aaKnown RBP11.95□□□□□ -0.5
SHMT2-219ENST00000555563 NOX3Q9HBY0 568 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 MOV10Q9HCE1 1003 aaKnown RBP11.95□□□□□ -0.5
SHMT2-219ENST00000555563 ZNF701Q9NV72 531 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-219ENST00000555563 MOKQ9UQ07 419 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 ATP23Q9Y6H3 246 aa11.95□□□□□ -0.5
SHMT2-219ENST00000555563 ALPK2Q86TB3 2170 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 TRBV4-1A0A0J9YWV2 114 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 OVOL3O00110 214 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 TMCC2O75069 709 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 TRMUO75648 421 aaKnown RBP11.94□□□□□ -0.5
SHMT2-219ENST00000555563 HLA-HP01893 362 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 PAX1P15863 534 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 CBR1P16152 277 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 ACADSP16219 412 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 ITGA2P17301 1181 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 PAX7P23759 505 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 IDH3GP51553 393 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-219ENST00000555563 CLRN1P58418 232 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 NAAAQ02083 359 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 NPRL3Q12980 569 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 C3orf36Q3SXR2 165 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 SHEQ5VZ18 495 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 LRFN4Q6PJG9 635 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 CYP2R1Q6VVX0 501 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 OAFQ86UD1 273 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 DTX2Q86UW9 622 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 CCDC36Q8IYA8 594 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 DEPDC4Q8N2C3 294 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 FAM169BQ8N8A8 192 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 LRRC75AQ8NAA5 344 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 SYT14Q8NB59 555 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 FAM46AQ96IP4 442 aaKnown RBP11.94□□□□□ -0.5
SHMT2-219ENST00000555563 ZNF347Q96SE7 839 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 DHRS9Q9BPW9 319 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 TRAF4Q9BUZ4 470 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-219ENST00000555563 KATNB1Q9BVA0 655 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 FAIMQ9NVQ4 179 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 ZNF224Q9NZL3 707 aa11.94□□□□□ -0.5
SHMT2-219ENST00000555563 SETD2Q9BYW2 2564 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-219ENST00000555563 MED13LQ71F56 2210 aa11.93□□□□□ -0.5
SHMT2-219ENST00000555563 CENPBD1B2RD01 187 aa11.93□□□□□ -0.5
SHMT2-219ENST00000555563 ARHGEF9O43307 516 aa11.93□□□□□ -0.5
SHMT2-219ENST00000555563 DHHO43323 396 aa11.93□□□□□ -0.5
SHMT2-219ENST00000555563 CD8AP01732 235 aa11.93□□□□□ -0.5
SHMT2-219ENST00000555563 IGHMP01871 453 aa11.93□□□□□ -0.5
SHMT2-219ENST00000555563 QDPRP09417 244 aa11.93□□□□□ -0.5
SHMT2-219ENST00000555563 TTKP33981 857 aa11.93□□□□□ -0.5
SHMT2-219ENST00000555563 ARR3P36575 388 aa11.93□□□□□ -0.5
SHMT2-219ENST00000555563 CDKN1AP38936 164 aa11.93□□□□□ -0.5
SHMT2-219ENST00000555563 LIMS1P48059 325 aa11.93□□□□□ -0.5
SHMT2-219ENST00000555563 SLC9A3P48764 834 aa11.93□□□□□ -0.5
SHMT2-219ENST00000555563 ATP5J2P56134 94 aa11.93□□□□□ -0.5
SHMT2-219ENST00000555563 MYBPC1Q00872 1141 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms