RNA–Protein interactions for RNA: ENST00000555381.5

ATXN3-232, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-232ENST00000555381 RAB39BQ96DA2 213 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 FAM120BQ96EK7 910 aaKnown RBP4.11□□□□□ -1.75
ATXN3-232ENST00000555381 OTUB1Q96FW1 271 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-232ENST00000555381 EGLN2Q96KS0 407 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 CCT8L2Q96SF2 557 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 SDF2Q99470 211 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 DUSP26Q9BV47 211 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 CCDC106Q9BWC9 280 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 C1QTNF5Q9BXJ0 243 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 RSPO3Q9BXY4 272 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-232ENST00000555381 ACTRT3Q9BYD9 372 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 NMUR2Q9GZQ4 415 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 KLK15Q9H2R5 256 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 TPK1Q9H3S4 243 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 ZNF385DQ9H6B1 395 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 REEP4Q9H6H4 257 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 RRAGDQ9NQL2 400 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-232ENST00000555381 CTPS2Q9NRF8 586 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 ZNF275Q9NSD4 429 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-232ENST00000555381 ZCCHC3Q9NUD5 404 aaKnown RBP4.11□□□□□ -1.75
ATXN3-232ENST00000555381 OPN4Q9UHM6 478 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 FAF1Q9UNN5 650 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-232ENST00000555381 POLR3HQ9Y535 204 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-232ENST00000555381 TIMM22Q9Y584 194 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 COX11Q9Y6N1 276 aa4.11□□□□□ -1.75
ATXN3-232ENST00000555381 PLCE1Q9P212 2302 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 PPIAL4EA0A075B759 164 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 A0A087WWL8 130 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 PPIAL4CA0A0B4J2A2 164 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 DNAJC9-AS1A6NH13 148 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 DUXAA6NLW8 204 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 PPIAL4DF5H284 164 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 SCAMP2O15127 329 aaKnown RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 ZNF208O43345 1280 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 SEC22BO75396 215 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 SKAP2O75563 359 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 RSL1D1O76021 490 aaKnown RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 VAMP5O95183 116 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 CSTAP01040 98 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 IGLV2-14P01704 120 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 UBTFL6P0CB48 400 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 PPIAL4FP0DN26 164 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 CCNA2P20248 432 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 MDKP21741 143 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 GLRXP35754 106 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 RAD52P43351 418 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 ALDH3B1P43353 468 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 HTR3AP46098 478 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 CCT3P49368 545 aaKnown RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 PLTPP55058 493 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 SH3BGRP55822 239 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 TUBA1BP68363 451 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 TUBA4AP68366 448 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 CAV1Q03135 178 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 LCP2Q13094 533 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 SKP2Q13309 424 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 SNTB2Q13425 540 aaKnown RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 KIAA0040Q15053 153 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 SLC9A3R2Q15599 337 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 ZNF141Q15928 474 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 OTUD3Q5T2D3 398 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 PDZK1Q5T2W1 519 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 AP1ARQ63HQ0 302 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 TMEM225Q6GV28 225 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 LEG1Q6P5S2 330 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 C16orf87Q6PH81 154 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 PAQR6Q6TCH4 344 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 TUBA1AQ71U36 451 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 LRRC8AQ8IWT6 810 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 BOLLQ8N9W6 283 aaKnown RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 OR9K2Q8NGE7 335 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 POP5Q969H6 163 aaKnown RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 TMIGD2Q96BF3 282 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 DDIT4LQ96D03 193 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 MTERF3Q96E29 417 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 ZNF385AQ96PM9 386 aaKnown RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 DUX5Q96PT3 197 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 KCNA7Q96RP8 456 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 MRPL37Q9BZE1 423 aaKnown RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 OR11A1Q9GZK7 315 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 DPH5Q9H2P9 285 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 SMURF2Q9HAU4 748 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 BEX1Q9HBH7 125 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 CRLF2Q9HC73 371 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 PLEK2Q9NYT0 353 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 PDP1Q9P0J1 537 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 MID2Q9UJV3 735 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 NUP50Q9UKX7 468 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 ZNF346Q9UL40 294 aaKnown RBP4.1□□□□□ -1.75
ATXN3-232ENST00000555381 PCDHGB4Q9UN71 923 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 KCNE3Q9Y6H6 103 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 NOTCH1P46531 2555 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 EXPH5Q8NEV8 1989 aa4.1□□□□□ -1.75
ATXN3-232ENST00000555381 TMED7-TICAM2A0A0A6YYA0 188 aa4.09□□□□□ -1.75
ATXN3-232ENST00000555381 A0A1W2PPL8 197 aa4.09□□□□□ -1.75
ATXN3-232ENST00000555381 LINC00473A8K010 186 aa4.09□□□□□ -1.75
ATXN3-232ENST00000555381 H3BQF6 201 aa4.09□□□□□ -1.75
ATXN3-232ENST00000555381 RPL36A-HNRNPH2H7BZ11 118 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms