RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 COX4I1P13073 169 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 ZNF14P17017 642 aaPredicted RBP10.26□□□□□ -0.77
VRK1-204ENST00000555351 NPR2P20594 1047 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 PTNP21246 168 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 CALCRP30988 508 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 DAP3P51398 398 aaKnown RBP10.26□□□□□ -0.77
VRK1-204ENST00000555351 IDH3GP51553 393 aaPredicted RBP10.26□□□□□ -0.77
VRK1-204ENST00000555351 ZNF133P52736 654 aaPredicted RBP10.26□□□□□ -0.77
VRK1-204ENST00000555351 TUBA1BP68363 451 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 TUBA4AP68366 448 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 HGFACQ04756 655 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 TAF11Q15544 211 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 ANKDD1AQ495B1 522 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 CARD17Q5XLA6 110 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 TUBA1AQ71U36 451 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 SLC15A3Q8IY34 581 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 LRRC17Q8N6Y2 441 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 C10orf105Q8TEF2 133 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 FAM168AQ92567 244 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 SGTBQ96EQ0 304 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 PRRC1Q96M27 445 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 MRPL13Q9BYD1 178 aaKnown RBP10.26□□□□□ -0.77
VRK1-204ENST00000555351 SMURF2Q9HAU4 748 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 CMTM6Q9NX76 183 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 ARMCX1Q9P291 453 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 MED31Q9Y3C7 131 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 SPEF1Q9Y4P9 236 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 FN1P02751 2386 aaKnown RBP10.25□□□□□ -0.77
VRK1-204ENST00000555351 CR1P17927 2039 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 IGHV4-30-2A0A087WSY4 118 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 GMNCA6NCL1 334 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 KPNA4O00629 521 aaPredicted RBP10.25□□□□□ -0.77
VRK1-204ENST00000555351 DHHO43323 396 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 FARS2O95363 451 aaKnown RBP10.25□□□□□ -0.77
VRK1-204ENST00000555351 HLA-HP01893 362 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 IFNW1P05000 195 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 OR8G3PP0DMU2 310 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 UMPSP11172 480 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 ZNF35P13682 527 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 FUT1P19526 365 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 NR4A1P22736 598 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 CAPZA2P47755 286 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 UGT2B15P54855 530 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 RAB1AP62820 205 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 RPL18Q07020 188 aaKnown RBP10.25□□□□□ -0.77
VRK1-204ENST00000555351 PIN1Q13526 163 aaPredicted RBP10.25□□□□□ -0.77
VRK1-204ENST00000555351 LRRC23Q53EV4 343 aaPredicted RBP10.25□□□□□ -0.77
VRK1-204ENST00000555351 LRFN4Q6PJG9 635 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 DEF8Q6ZN54 512 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 NKAIN4Q8IVV8 208 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 WDFY1Q8IWB7 410 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 RNF113BQ8IZP6 322 aaKnown RBP10.25□□□□□ -0.77
VRK1-204ENST00000555351 OFCC1Q8IZS5 231 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 SLC22A24Q8N4F4 322 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 FNDC8Q8TC99 324 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 TMEM255BQ8WV15 326 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 CMTM5Q96DZ9 223 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 TNFRSF13CQ96RJ3 184 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 RAB1BQ9H0U4 201 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 C1orf198Q9H425 327 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 ZNF224Q9NZL3 707 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 A4GNTQ9UNA3 340 aa10.25□□□□□ -0.77
VRK1-204ENST00000555351 ABCA2Q9BZC7 2435 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 LOC390937A0A1W2PQ73 354 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 VWC2LB2RUY7 222 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 INAFM1C9JVW0 142 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 BLOC1S5-TXNDC5H3BN57 136 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 CRLF1O75462 422 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 SERPINI2O75830 405 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 RAB36O95755 333 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 PTHP01270 115 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 SERPINA5P05154 406 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 ERCC1P07992 297 aaPredicted RBP10.24□□□□□ -0.77
VRK1-204ENST00000555351 CELA3BP08861 270 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 CD79AP11912 226 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 B4GALT1P15291 398 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 ACADSP16219 412 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 TNFRSF1BP20333 461 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 PRDX6P30041 224 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 THBS4P35443 961 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 GLRXP35754 106 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 OR1E2P47887 323 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 PDLIM4P50479 330 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 ZNF84P51523 738 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 RPS23P62266 143 aaKnown RBP10.24□□□□□ -0.77
VRK1-204ENST00000555351 VLDLRP98155 873 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 LIPEQ05469 1076 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 NPRL3Q12980 569 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 DAG1Q14118 895 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 C10orf128Q5T292 105 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 CBLL1Q75N03 491 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 SPATA21Q7Z572 469 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 MYPOPQ86VE0 399 aaPredicted RBP10.24□□□□□ -0.77
VRK1-204ENST00000555351 ZNF525Q8N782 197 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 POU5F2Q8N7G0 328 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 FAM156AQ8NDB6 213 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 ZNF540Q8NDQ6 660 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 NEU4Q8WWR8 484 aaPredicted RBP10.24□□□□□ -0.77
VRK1-204ENST00000555351 GEMIN6Q8WXD5 167 aaKnown RBP10.24□□□□□ -0.77
VRK1-204ENST00000555351 ASB10Q8WXI3 467 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms