RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 OTULINQ96BN8 352 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 FAM210AQ96ND0 272 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 KCNS3Q9BQ31 491 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 NEURL2Q9BR09 285 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 ALG8Q9BVK2 526 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 RNF167Q9H6Y7 350 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 PNO1Q9NRX1 252 aaKnown RBP10.02□□□□□ -0.81
SHMT2-216ENST00000554975 PAIP2BQ9ULR5 123 aaKnown RBP10.02□□□□□ -0.81
SHMT2-216ENST00000554975 CARD8Q9Y2G2 431 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 NOX1Q9Y5S8 564 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 ARID1AO14497 2285 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 NPIPA5A0A0B4J1W7 369 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 CENPVL1A0A0U1RR11 272 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 ANKRD61A6NGH8 418 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 NPIPA7E9PJI5 369 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 BOLA2-SMG1P6H3BVE0 249 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 GABRPO00591 440 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 NEURL1O76050 574 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 CSTAP01040 98 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 TPOP07202 933 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 GKN3PP0CG01 181 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 TRAPPC2P0DI81 140 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 TRAPPC2BP0DI82 140 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 NPIPA8P0DM63 369 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 PRG2P13727 222 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 APEHP13798 732 aaKnown RBP10.01□□□□□ -0.81
SHMT2-216ENST00000554975 HPGDP15428 266 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 TBXA2RP21731 343 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 CHRNB4P30926 498 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 ADH7P40394 386 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 PRPS1P60891 318 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 MRPL28Q13084 256 aaKnown RBP10.01□□□□□ -0.81
SHMT2-216ENST00000554975 ZNF267Q14586 743 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-216ENST00000554975 ZNF791Q3KP31 576 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-216ENST00000554975 ZNF468Q5VIY5 522 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-216ENST00000554975 H3F3CQ6NXT2 135 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 FAM131AQ6UXB0 335 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 NUP54Q7Z3B4 507 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 OAFQ86UD1 273 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 AKAP14Q86UN6 197 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 TPRA1Q86W33 373 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 OR8H2Q8N162 312 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 SYS1Q8N2H4 156 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 ZBTB8BQ8NAP8 495 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-216ENST00000554975 FAM71CQ8NEG0 241 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 OR51G2Q8NGK0 314 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 PFN4Q8NHR9 129 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 FAM57AQ8TBR7 257 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 M1APQ8TC57 530 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 SPRYD4Q8WW59 207 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-216ENST00000554975 ASB5Q8WWX0 329 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 GATAD2BQ8WXI9 593 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 ASB15Q8WXK1 588 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 CNOT9Q92600 299 aaKnown RBP10.01□□□□□ -0.81
SHMT2-216ENST00000554975 GPX7Q96SL4 187 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-216ENST00000554975 CNN2Q99439 309 aaKnown RBP10.01□□□□□ -0.81
SHMT2-216ENST00000554975 TMEM43Q9BTV4 400 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 PRR14Q9BWN1 585 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 SRRQ9GZT4 340 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 SLC22A4Q9H015 551 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 OR10A5Q9H207 317 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 KCNJ16Q9NPI9 418 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 RABL2AQ9UBK7 228 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-216ENST00000554975 KCNE5Q9UJ90 142 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 ICAM5Q9UMF0 924 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 RABL2BQ9UNT1 228 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 ERVK-19Q9WJR5 959 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 V9GYH0 126 aa10.01□□□□□ -0.81
SHMT2-216ENST00000554975 A0A1B0GTH9 108 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 C2orf92A0A1B0GVN3 265 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 J3QRE1 110 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 SCDO00767 359 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 SNPHO15079 494 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 ARPC3O15145 178 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 RNF13O43567 381 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 IFNA16P05015 189 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 CD1AP06126 327 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 SP1P08047 785 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 SBK2P0C263 348 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 UBL4AP11441 157 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 IMPDH2P12268 514 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 ZNF24P17028 368 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 CELP19835 753 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 MAKP20794 623 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 S1PR1P21453 382 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 DNASE1P24855 282 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 RPS5P46782 204 aaKnown RBP10□□□□□ -0.81
SHMT2-216ENST00000554975 RFX3P48380 749 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 SLC26A5P58743 744 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 LSM11P83369 360 aaKnown RBP eCLIP10□□□□□ -0.81
SHMT2-216ENST00000554975 CRYZQ08257 329 aaKnown RBP10□□□□□ -0.81
SHMT2-216ENST00000554975 ASAH1Q13510 395 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 RIN1Q13671 783 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 GGTLC2Q14390 218 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 EMC4Q5J8M3 183 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 TRIQKQ629K1 86 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 WBP2NLQ6ICG8 309 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 ZNF544Q6NX49 715 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 CLEC9AQ6UXN8 241 aa10□□□□□ -0.81
SHMT2-216ENST00000554975 WDR88Q6ZMY6 472 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms