RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 MITFO75030 526 aaPredicted RBP14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 SMNDC1O75940 238 aaKnown RBP eCLIP14.54□□□□□ -0.086e-9■■■■■ 31.1
SPTLC2-203ENST00000554901 HMGN1P05114 100 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 IGFBP1P08833 259 aaPredicted RBP14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 POU1F1P28069 291 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 ACVR1BP36896 505 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 TOP3AQ13472 1001 aaPredicted RBP14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 KRR1Q13601 381 aaKnown RBP14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 PTGES3Q15185 160 aaKnown RBP14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 STK11Q15831 433 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 HIST3H3Q16695 136 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 LRRC36Q1X8D7 754 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 PGGHGQ32M88 737 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 FBXL19-AS1Q494R0 122 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 Q6ZT83 130 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 LIX1LQ8IVB5 337 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 C20orf196Q8IYI0 205 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 NOXO1Q8NFA2 376 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 ITLN2Q8WWU7 325 aaPredicted RBP14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 KCNK17Q96T54 332 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 PRRG3Q9BZD7 231 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 B3GAT2Q9NPZ5 323 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 FLNCQ14315 2725 aa14.54□□□□□ -0.08
SPTLC2-203ENST00000554901 TEX13CA0A0J9YWL9 993 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 ZG16O60844 167 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 TRMUO75648 421 aaKnown RBP14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 CSNK1A1P48729 337 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 ASCL1P50553 236 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 MYBPC1Q00872 1141 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 CAMK2DQ13557 499 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 GINS1Q14691 196 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 TSPO2Q5TGU0 170 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 GPR137CQ8N3F9 429 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 RELL2Q8NC24 303 aaPredicted RBP14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 OR6N1Q8NGY5 312 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 TMEM54Q969K7 222 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 LRRC46Q96FV0 321 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 SLC7A10Q9NS82 523 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 SMPD3Q9NY59 655 aaPredicted RBP14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 ELOVL5Q9NYP7 299 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 UPB1Q9UBR1 384 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 KLHL21Q9UJP4 597 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 RELNP78509 3460 aa14.53□□□□□ -0.08
SPTLC2-203ENST00000554901 PRSS37A4D1T9 235 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 CLEC18AA5D8T8 446 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 ZAR1LA6NP61 321 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 EEF1E1-BLOC1S5C9J1V9 151 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 H0YJX3 145 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 RPL36A-HNRNPH2H7BZ11 118 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 ARHGEF9O43307 516 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 EEF1E1O43324 174 aaKnown RBP14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 AGFG2O95081 481 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 IFNGP01579 166 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 ZNF133P52736 654 aaPredicted RBP14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 CLRN1P58418 232 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 ITGADQ13349 1161 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 P2RY6Q15077 328 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 MESTQ5EB52 335 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 THEM4Q5T1C6 240 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 CLEC18BQ6UXF7 455 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 FAM26EQ8N5C1 309 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 ZNF610Q8N9Z0 462 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 CLEC18CQ8NCF0 446 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 OR4Q3Q8NH05 313 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 HDAC2Q92769 488 aaKnown RBP14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 RASD2Q96D21 266 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 RBP7Q96R05 134 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 RIBC2Q9H4K1 309 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 KCNJ16Q9NPI9 418 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 CMC2Q9NRP2 79 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 ASB6Q9NWX5 421 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 GLTPQ9NZD2 209 aa14.52□□□□□ -0.08
SPTLC2-203ENST00000554901 ALPK2Q86TB3 2170 aa14.52□□□□□ -0.09
SPTLC2-203ENST00000554901 ZNF587BE7ETH6 402 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 KRT33AO76009 404 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 CLDN14O95500 239 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 HIST1H1CP16403 213 aaKnown RBP14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 EDNRAP25101 427 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 RUNX1T1Q06455 604 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 SLX4IPQ5VYV7 408 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 JAZF1Q86VZ6 243 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 GABRG1Q8N1C3 465 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 UBE2J2Q8N2K1 259 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 GALNT4Q8N4A0 578 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 NMD3Q96D46 503 aaKnown RBP14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 SLC38A2Q96QD8 506 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 GRIP2Q9C0E4 1043 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 OPN3Q9H1Y3 402 aaPredicted RBP14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 VSX1Q9NZR4 365 aaPredicted RBP14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 DOPEY1Q5JWR5 2465 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 RIIAD1A6NNX1 92 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 E9PQ18 207 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 PYCARD-AS1I3L0S3 204 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 RENP00797 406 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 ZNF3P17036 446 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 COX5AP20674 150 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 MPGP29372 298 aa14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 PTDSS1P48651 473 aaKnown RBP14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 SH3BGRP55822 239 aaPredicted RBP14.51□□□□□ -0.09
SPTLC2-203ENST00000554901 CD47Q08722 323 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms