RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 CCDC124Q96CT7 223 aaKnown RBP12.06□□□□□ -0.48
NUMB-209ENST00000554315 SLC7A6OSQ96CW6 309 aaPredicted RBP12.06□□□□□ -0.48
NUMB-209ENST00000554315 MBD6Q96DN6 1003 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 HS3ST6Q96QI5 342 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 DENND2DQ9H6A0 471 aaPredicted RBP12.06□□□□□ -0.48
NUMB-209ENST00000554315 UBTD1Q9HAC8 227 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 ITGB1BP2Q9UKP3 347 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 A0A096LPE4 126 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 TRBV4-1A0A0J9YWV2 114 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 A0A1W2PPZ6 126 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 A0A1W2PR80 420 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 M0R1B8 84 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 ACOT8O14734 319 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 GSC2O15499 205 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 QDPRP09417 244 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 PGA4P0DJD7 388 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 PGA3P0DJD8 388 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 ATP6V1B2P21281 511 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 CD40P25942 277 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 GUCA1AP43080 201 aaPredicted RBP12.06□□□□□ -0.48
NUMB-209ENST00000554315 ZNF84P51523 738 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 RPL27P61353 136 aaKnown RBP12.06□□□□□ -0.48
NUMB-209ENST00000554315 LSM11P83369 360 aaKnown RBP eCLIP12.06□□□□□ -0.48
NUMB-209ENST00000554315 MELKQ14680 651 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 ZNF611Q8N823 705 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 IL17RDQ8NFM7 739 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 ASB10Q8WXI3 467 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 NANOS1Q8WY41 292 aaKnown RBP12.06□□□□□ -0.48
NUMB-209ENST00000554315 AKAP1Q92667 903 aaKnown RBP eCLIP12.06□□□□□ -0.48
NUMB-209ENST00000554315 NRGNQ92686 78 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 CLPTM1LQ96KA5 538 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 KCNS3Q9BQ31 491 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 C1QTNF6Q9BXI9 259 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 MRPL13Q9BYD1 178 aaKnown RBP12.06□□□□□ -0.48
NUMB-209ENST00000554315 LIME1Q9H400 295 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 YY1AP1Q9H869 796 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 GRHPRQ9UBQ7 328 aa12.06□□□□□ -0.48
NUMB-209ENST00000554315 ZNF346Q9UL40 294 aaKnown RBP12.06□□□□□ -0.48
NUMB-209ENST00000554315 CREBBPQ92793 2442 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 TEX15Q9BXT5 2789 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 TCRBV5S2A0A599 114 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 ABCD4O14678 606 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 HS3ST1O14792 307 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 DHHO43323 396 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 AHCYL1O43865 530 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 OR10H3O60404 316 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 PTP4A3O75365 173 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 TRMUO75648 421 aaKnown RBP12.05□□□□□ -0.48
NUMB-209ENST00000554315 NDUFB2O95178 105 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 FARS2O95363 451 aaKnown RBP12.05□□□□□ -0.48
NUMB-209ENST00000554315 RAP2AP10114 183 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 CBR1P16152 277 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 FUT4P22083 530 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 ARR3P36575 388 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 MAGEA2P43356 314 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 GPR4P46093 362 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 OMPP47874 163 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 IST1P53990 364 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 GK3PQ14409 553 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 HIST3H3Q16695 136 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 PHYHD1Q5SRE7 291 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 THEM4Q5T1C6 240 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 ARMC4Q5T2S8 1044 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 LRFN4Q6PJG9 635 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 SLC22A25Q6T423 547 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 SEZ6L2Q6UXD5 910 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 ZNF813Q6ZN06 617 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 DPPA2Q7Z7J5 298 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 FAM46AQ96IP4 442 aaKnown RBP12.05□□□□□ -0.48
NUMB-209ENST00000554315 FOXB1Q99853 325 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 FUZQ9BT04 418 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 ALG12Q9BV10 488 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 CCM2LQ9NUG4 571 aaPredicted RBP12.05□□□□□ -0.48
NUMB-209ENST00000554315 PLEKHA6Q9Y2H5 1048 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 SPG11Q96JI7 2443 aa12.05□□□□□ -0.48
NUMB-209ENST00000554315 TRAV27A0A087WT01 109 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 A0A1W2PPR1 153 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 UNC119BA6NIH7 251 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 TNFRSF11BO00300 401 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 XKRYO14609 159 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 ATE1O95260 518 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 IGHMP01871 453 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 CD14P08571 375 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 OR8G3PP0DMU2 310 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 ACVR1BP36896 505 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 CAPZA2P47755 286 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 FLOT2Q14254 428 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 NRN1LQ496H8 165 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 ZNF672Q499Z4 452 aaPredicted RBP12.04□□□□□ -0.48
NUMB-209ENST00000554315 GPR139Q6DWJ6 353 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 ARIH2OSQ8N7S6 290 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 SYT14Q8NB59 555 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 OR13C2Q8NGS9 318 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 GNPDA2Q8TDQ7 276 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 FBXW5Q969U6 566 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 MCHR2Q969V1 340 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 ZNF837Q96EG3 531 aaPredicted RBP12.04□□□□□ -0.48
NUMB-209ENST00000554315 FOXC2Q99958 501 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 KCNN2Q9H2S1 579 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 SMURF2Q9HAU4 748 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms