RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 DIO1P49895 249 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 DAP3P51398 398 aaKnown RBP12.9□□□□□ -0.34
SHMT2-208ENST00000553868 GFRA1P56159 465 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 ERVK-25P63136 954 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 BCL2A1Q16548 175 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 ZNF239Q16600 458 aaKnown RBP12.9□□□□□ -0.34
SHMT2-208ENST00000553868 GXYLT1Q4G148 440 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 SLC35F1Q5T1Q4 408 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 FAM205BPQ63HN1 556 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 PAQR6Q6TCH4 344 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 HDDC2Q7Z4H3 204 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 IGFN1Q86VF2 1251 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 JAZF1Q86VZ6 243 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 CCDC103Q8IW40 242 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 MYDGFQ969H8 173 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 DNAJA3Q96EY1 480 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 MRPS26Q9BYN8 205 aaKnown RBP12.9□□□□□ -0.34
SHMT2-208ENST00000553868 EXO5Q9H790 373 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 FANCFQ9NPI8 374 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 TAS2R5Q9NYW4 299 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 RASD1Q9Y272 281 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 HRNRQ86YZ3 2850 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-208ENST00000553868 TRIM64A6NGJ6 449 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 A6NIZ1 184 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 KDM4EB2RXH2 506 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-208ENST00000553868 C11orf98E9PRG8 122 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 XKRYO14609 159 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 PRODHO43272 600 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 AKR7A3O95154 331 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 VAMP5O95183 116 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 IGHMP01871 453 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 OPN1LWP04000 364 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 F13BP05160 661 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 SHC1P29353 583 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 RAP1BP61224 184 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 RPS3AP61247 264 aaKnown RBP12.89□□□□□ -0.35
SHMT2-208ENST00000553868 RAP1AP62834 184 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 TMED1Q13445 227 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 NXNL2Q5VZ03 156 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 HBMQ6B0K9 141 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 LAIR2Q6ISS4 152 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 TMEM154Q6P9G4 183 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 PXKQ7Z7A4 578 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 ADCK1Q86TW2 530 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 DMRTC2Q8IXT2 367 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-208ENST00000553868 MEIOBQ8N635 442 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 ZNF540Q8NDQ6 660 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 OR52E2Q8NGJ4 325 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 OR2V1Q8NHB1 315 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 ZNF582Q96NG8 517 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-208ENST00000553868 TXNIPQ9H3M7 391 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 LDAHQ9H6V9 325 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 ZDHHC11Q9H8X9 412 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 VCX3AQ9NNX9 186 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 PAQR5Q9NXK6 330 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-208ENST00000553868 CNOT2Q9NZN8 540 aaKnown RBP12.89□□□□□ -0.35
SHMT2-208ENST00000553868 DNAJC27Q9NZQ0 273 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.89□□□□□ -0.35
SHMT2-208ENST00000553868 NOX1Q9Y5S8 564 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 SNX5Q9Y5X3 404 aa12.89□□□□□ -0.35
SHMT2-208ENST00000553868 CUBNO60494 3623 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 TRGV5A0A0B4J1U4 118 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 A0A0J9YW62 118 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 TEX13CA0A0J9YWL9 993 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 LOC102725191A0A1B0GVB3 256 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 AQP7P3A6NL99 342 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 FAM90A27PA6NNH2 459 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 CLCA1A8K7I4 914 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 PTGES3LE9PB15 166 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 NPIPA5E9PKD4 350 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 EIF1AYO14602 144 aaKnown RBP12.88□□□□□ -0.35
SHMT2-208ENST00000553868 ENTPD6O75354 484 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 RENP00797 406 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 CDH11P55287 796 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 CARD18P57730 90 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 RAC3P60763 192 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 RPL27P61353 136 aaKnown RBP12.88□□□□□ -0.35
SHMT2-208ENST00000553868 TUBA4AP68366 448 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 TFF3Q07654 80 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.88□□□□□ -0.35
SHMT2-208ENST00000553868 LGALS3BPQ08380 585 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 ITGADQ13349 1161 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 KRR1Q13601 381 aaKnown RBP12.88□□□□□ -0.35
SHMT2-208ENST00000553868 SMN1Q16637 294 aaKnown RBP12.88□□□□□ -0.35
SHMT2-208ENST00000553868 KLHL22Q53GT1 634 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 ARMC4Q5T2S8 1044 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 AADACL4Q5VUY2 407 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 TMEM225Q6GV28 225 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 ZNF773Q6PK81 442 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 FAM122BQ7Z309 247 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 CPOQ8IVL8 374 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 UEVLDQ8IX04 471 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 ARIH2OSQ8N7S6 290 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 NEIL3Q8TAT5 605 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 ABTB1Q969K4 478 aaPredicted RBP12.88□□□□□ -0.35
SHMT2-208ENST00000553868 OTULINQ96BN8 352 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 OXGR1Q96P68 337 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 SNX18Q96RF0 628 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 SLC6A15Q9H2J7 730 aa12.88□□□□□ -0.35
SHMT2-208ENST00000553868 HINT3Q9NQE9 182 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms