RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 MED12LQ86YW9 2145 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 HCFC1P51610 2035 aa7.34□□□□□ -1.24
PSEN1-209ENST00000553855 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.33□□□□□ -1.24
PSEN1-209ENST00000553855 EFCAB9A8MZ26 197 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 LRRN3E7EW58 273 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 MS4A18H0YCH9 400 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 M0R3G1 203 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 ARPC2O15144 300 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 GYG2O15488 501 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 CLOCKO15516 846 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 ZNF205O95201 554 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 RAF1P04049 648 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 FABP3P05413 133 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 IFNGR2P38484 337 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 GUCA1AP43080 201 aaPredicted RBP7.33□□□□□ -1.24
PSEN1-209ENST00000553855 CAPZA2P47755 286 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 CSNK1A1P48729 337 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 P2RY4P51582 365 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 UGT2B15P54855 530 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 CLRN1P58418 232 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 ROR2Q01974 943 aaKnown RBP7.33□□□□□ -1.24
PSEN1-209ENST00000553855 LTBQ06643 244 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 ZP4Q12836 540 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 MS4A18Q3C1V0 323 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 ANKDD1AQ495B1 522 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 CARD17Q5XLA6 110 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 WDR88Q6ZMY6 472 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 SLC35D2Q76EJ3 337 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 DHFR2Q86XF0 187 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 CCDC36Q8IYA8 594 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 ZIC4Q8N9L1 334 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 PFN4Q8NHR9 129 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 ACOT11Q8WXI4 607 aaPredicted RBP7.33□□□□□ -1.24
PSEN1-209ENST00000553855 ZNF566Q969W8 418 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 BPIFA2Q96DR5 249 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 RADILQ96JH8 1075 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 LRR1Q96L50 414 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 MOGAT1Q96PD6 335 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 ALKBH3Q96Q83 286 aaPredicted RBP7.33□□□□□ -1.24
PSEN1-209ENST00000553855 ZNF347Q96SE7 839 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 PIP5K1AQ99755 562 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 PRSS27Q9BQR3 290 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 ZNF426Q9BUY5 554 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 ULBP2Q9BZM5 246 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 C1orf21Q9H246 121 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 INIPQ9NRY2 104 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 ACTR3BQ9P1U1 418 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 RHCGQ9UBD6 479 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 SEC14L4Q9UDX3 406 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 ST6GALNAC2Q9UJ37 374 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 POU2F3Q9UKI9 436 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 TMCC3Q9ULS5 477 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 A4GNTQ9UNA3 340 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 AURKCQ9UQB9 309 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 RNF115Q9Y4L5 304 aa7.33□□□□□ -1.24
PSEN1-209ENST00000553855 J3KTA2 159 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 hCG_2039718K7EN88 272 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 M0R1B8 84 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 TRAF3IP2O43734 574 aaPredicted RBP7.32□□□□□ -1.24
PSEN1-209ENST00000553855 FZD7O75084 574 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 ATP5HO75947 161 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 GADD45GO95257 159 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 LYPD3O95274 346 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 IGHG1P01857 330 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 THY1P04216 161 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 ITGA5P08648 1049 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 ASAH2BP0C7U1 165 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 PTAFRP25105 342 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 ADMP35318 185 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 MSX2P35548 267 aaPredicted RBP7.32□□□□□ -1.24
PSEN1-209ENST00000553855 RPL4P36578 427 aaKnown RBP7.32□□□□□ -1.24
PSEN1-209ENST00000553855 SLC9A3P48764 834 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 ZNF83P51522 516 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 ZNF84P51523 738 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 BIDP55957 195 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 KRTAP10-9P60411 292 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 SPIBQ01892 262 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 CHRNB3Q05901 458 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 CAMK2DQ13557 499 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 GABRA6Q16445 453 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 ACKR1Q16570 336 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 FAM98BQ52LJ0 330 aaKnown RBP7.32□□□□□ -1.24
PSEN1-209ENST00000553855 ALG10Q5BKT4 473 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 ANKRD16Q6P6B7 361 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 ZNF704Q6ZNC4 412 aaPredicted RBP7.32□□□□□ -1.24
PSEN1-209ENST00000553855 RINLQ6ZS11 566 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 MBOAT2Q6ZWT7 520 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 OAFQ86UD1 273 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 NRMQ8IXM6 262 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 OR1K1Q8NGR3 316 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 OR6X1Q8NH79 312 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 PIGTQ969N2 578 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 MUS81Q96NY9 551 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 OR2M2Q96R28 347 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 THTPAQ9BU02 230 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 EMC6Q9BV81 110 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 NMNAT1Q9HAN9 279 aaPredicted RBP7.32□□□□□ -1.24
PSEN1-209ENST00000553855 CRLF2Q9HC73 371 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 SLC17A5Q9NRA2 495 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 FAIMQ9NVQ4 179 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms