RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 HADHQ16836 314 aaKnown RBP1.78□□□□□ -2.12
VRK1-202ENST00000553683 TMEM183BQ1AE95 376 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 RFX4Q33E94 735 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 LINC00483Q53H64 154 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 XKR4Q5GH76 650 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 GPR157Q5UAW9 335 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 ANXA8L1Q5VT79 327 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 TWF2Q6IBS0 349 aaKnown RBP1.78□□□□□ -2.12
VRK1-202ENST00000553683 SLC25A24Q6NUK1 477 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 C19orf35Q6ZS72 473 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 USP50Q70EL3 339 aaPredicted RBP1.78□□□□□ -2.12
VRK1-202ENST00000553683 NANOGNBQ7Z5D8 188 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 KIAA1328Q86T90 577 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 COMTD1Q86VU5 262 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 CCDC50Q8IVM0 306 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 TMEM183AQ8IXX5 376 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 ATP6V0D2Q8N8Y2 350 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 OR4F15Q8NGB8 312 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 OR4K14Q8NGD5 310 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 CDC26Q8NHZ8 85 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 CCDC110Q8TBZ0 833 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 DTX3LQ8TDB6 740 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 PPP1R14BQ96C90 147 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 SNF8Q96H20 258 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 ITCHQ96J02 903 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 ZNF578Q96N58 590 aaPredicted RBP1.78□□□□□ -2.12
VRK1-202ENST00000553683 TAAR1Q96RJ0 339 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 SECISBP2Q96T21 854 aaKnown RBP1.78□□□□□ -2.12
VRK1-202ENST00000553683 CGREF1Q99674 301 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 ZNF416Q9BWM5 594 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 SPZ1Q9BXG8 430 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 CDC42EP4Q9H3Q1 356 aaKnown RBP1.78□□□□□ -2.12
VRK1-202ENST00000553683 SRMSQ9H3Y6 488 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 LY9Q9HBG7 655 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 POPDC2Q9HBU9 364 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 RPRD1BQ9NQG5 326 aaKnown RBP1.78□□□□□ -2.12
VRK1-202ENST00000553683 HMGXB4Q9UGU5 601 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 OPN4Q9UHM6 478 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 RPH3ALQ9UNE2 315 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 ATP6V1DQ9Y5K8 247 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 GMEB1Q9Y692 573 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 PTPRMP28827 1452 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 PCNTO95613 3336 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 TNS2Q63HR2 1409 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 ATP8B3O60423 1300 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 XKRY2A2RUG3 117 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 GOLGA6L4A6NEF3 574 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 NCF1BA6NI72 391 aaPredicted RBP1.77□□□□□ -2.13
VRK1-202ENST00000553683 NCF1CA8MVU1 366 aaPredicted RBP1.77□□□□□ -2.13
VRK1-202ENST00000553683 GPR89AB7ZAQ6 455 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 GOLGA8SH3BPF8 625 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 LSM1O15116 133 aaKnown RBP1.77□□□□□ -2.13
VRK1-202ENST00000553683 CASC3O15234 703 aaKnown RBP1.77□□□□□ -2.13
VRK1-202ENST00000553683 ANGPTL7O43827 346 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 PFKFB2O60825 505 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 NOL3O60936 208 aaKnown RBP1.77□□□□□ -2.13
VRK1-202ENST00000553683 PEX11AO75192 247 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 BCAS1O75363 584 aaPredicted RBP1.77□□□□□ -2.13
VRK1-202ENST00000553683 ERLIN2O94905 339 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 KLHL2O95198 593 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 ZDHHC11BP0C7U3 371 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 GPR89BP0CG08 455 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 GALP22466 123 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 MSNP26038 577 aaKnown RBP1.77□□□□□ -2.13
VRK1-202ENST00000553683 DDOSTP39656 456 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 CXCL5P42830 114 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 TUFMP49411 452 aaKnown RBP1.77□□□□□ -2.13
VRK1-202ENST00000553683 EFNB2P52799 333 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 GBX2P52951 348 aaPredicted RBP1.77□□□□□ -2.13
VRK1-202ENST00000553683 PKNOX1P55347 436 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 GPX6P59796 221 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 EIF3EP60228 445 aaKnown RBP1.77□□□□□ -2.13
VRK1-202ENST00000553683 LIPEQ05469 1076 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 KDSRQ06136 332 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 SPAG1Q07617 926 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 PJVKQ0ZLH3 352 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 GRB7Q14451 532 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 KIAA0087Q14695 138 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 GNMTQ14749 295 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 CYTH1Q15438 398 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 SLC15A2Q16348 729 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 LY6EQ16553 131 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 TP53I3Q53FA7 332 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 COA6Q5JTJ3 125 aaKnown RBP1.77□□□□□ -2.13
VRK1-202ENST00000553683 C1orf220Q5T0J3 134 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 MARCH8Q5T0T0 291 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 LIN9Q5TKA1 542 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 TMEM53Q6P2H8 277 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 AFTPHQ6ULP2 937 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 KDM7AQ6ZMT4 941 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 ZNF620Q6ZNG0 422 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 TTC5Q8N0Z6 440 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 OR2L13Q8N349 312 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 RNF182Q8N6D2 247 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 ZNF321PQ8N8H1 164 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 OR10G2Q8NGC3 310 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 OR52M1Q8NGK5 317 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 OR10T2Q8NGX3 314 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 OR2G3Q8NGZ4 309 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 ACER1Q8TDN7 264 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms