RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 ARF1P84077 181 aaKnown RBP20.64■□□□□ 0.89
TDP1-205ENST00000553527 CEACAM16Q2WEN9 425 aa20.64■□□□□ 0.89
TDP1-205ENST00000553527 Q5PR19 223 aa20.64■□□□□ 0.89
TDP1-205ENST00000553527 ZNF730Q6ZMV8 503 aa20.64■□□□□ 0.89
TDP1-205ENST00000553527 PXKQ7Z7A4 578 aa20.64■□□□□ 0.89
TDP1-205ENST00000553527 OR52J3Q8NH60 311 aa20.64■□□□□ 0.89
TDP1-205ENST00000553527 PFN4Q8NHR9 129 aa20.64■□□□□ 0.89
TDP1-205ENST00000553527 BCL2L2Q92843 193 aaPredicted RBP20.64■□□□□ 0.89
TDP1-205ENST00000553527 ZNF837Q96EG3 531 aaPredicted RBP20.64■□□□□ 0.89
TDP1-205ENST00000553527 TMUB1Q9BVT8 246 aa20.64■□□□□ 0.89
TDP1-205ENST00000553527 CXorf56Q9H5V9 222 aa20.64■□□□□ 0.89
TDP1-205ENST00000553527 FKRPQ9H9S5 495 aa20.64■□□□□ 0.89
TDP1-205ENST00000553527 CRLF2Q9HC73 371 aa20.64■□□□□ 0.89
TDP1-205ENST00000553527 MEPEQ9NQ76 525 aaPredicted RBP20.64■□□□□ 0.89
TDP1-205ENST00000553527 BLOC1S5-TXNDC5H3BN57 136 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 RNF13O43567 381 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 PIP5K1CO60331 668 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 SOD3P08294 240 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 PTH2RP49190 550 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 ACTR3P61158 418 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 SHEQ5VZ18 495 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 KRTAP1-3Q8IUG1 177 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 WDFY1Q8IWB7 410 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 TMEM123Q8N131 208 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 DEPDC4Q8N2C3 294 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 SLC7A13Q8TCU3 470 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 SLCO4A1Q96BD0 722 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 RADILQ96JH8 1075 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 TAS2R5Q9NYW4 299 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 MGAT4BQ9UQ53 548 aa20.63■□□□□ 0.89
TDP1-205ENST00000553527 MAGED1Q9Y5V3 778 aaPredicted RBP20.63■□□□□ 0.89
TDP1-205ENST00000553527 ZNF469Q96JG9 3925 aaPredicted RBP20.62■□□□□ 0.89
TDP1-205ENST00000553527 TRBV4-1A0A0J9YWV2 114 aa20.62■□□□□ 0.89
TDP1-205ENST00000553527 SEC14L2O76054 403 aa20.62■□□□□ 0.89
TDP1-205ENST00000553527 IFNGR1P15260 489 aa20.62■□□□□ 0.89
TDP1-205ENST00000553527 BIDP55957 195 aa20.62■□□□□ 0.89
TDP1-205ENST00000553527 RPS4XP62701 263 aaKnown RBP20.62■□□□□ 0.89
TDP1-205ENST00000553527 OR2T5Q6IEZ7 315 aa20.62■□□□□ 0.89
TDP1-205ENST00000553527 ANKRD16Q6P6B7 361 aa20.62■□□□□ 0.89
TDP1-205ENST00000553527 PODNL1Q6PEZ8 512 aa20.62■□□□□ 0.89
TDP1-205ENST00000553527 RRM2BQ7LG56 351 aa20.62■□□□□ 0.89
TDP1-205ENST00000553527 NRMQ8IXM6 262 aa20.62■□□□□ 0.89
TDP1-205ENST00000553527 LRRC75A-AS1Q8N1F1 130 aa20.62■□□□□ 0.89
TDP1-205ENST00000553527 PAPD5Q8NDF8 572 aaKnown RBP20.62■□□□□ 0.89
TDP1-205ENST00000553527 OR6N1Q8NGY5 312 aa20.62■□□□□ 0.89
TDP1-205ENST00000553527 OR2T29Q8NH02 315 aa20.62■□□□□ 0.89
TDP1-205ENST00000553527 ZNF229Q9UJW7 825 aa20.62■□□□□ 0.89
TDP1-205ENST00000553527 ATP23Q9Y6H3 246 aa20.62■□□□□ 0.89
TDP1-205ENST00000553527 A0A087WUU8 490 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 RPL36A-HNRNPH2H7BZ11 118 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 KRT36O76013 467 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 CST1P01037 141 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 IGF2P01344 180 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 DANCRP0C864 163 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 FUT1P19526 365 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 PGGHGQ32M88 737 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 NHLRC1Q6VVB1 395 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 MBOAT2Q6ZWT7 520 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 NANOGNBQ7Z5D8 188 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 C20orf196Q8IYI0 205 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 RNF113BQ8IZP6 322 aaKnown RBP20.61■□□□□ 0.89
TDP1-205ENST00000553527 IGFBPL1Q8WX77 278 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 GTPBP3Q969Y2 492 aaKnown RBP20.61■□□□□ 0.89
TDP1-205ENST00000553527 SGTBQ96EQ0 304 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 DENND2DQ9H6A0 471 aaPredicted RBP20.61■□□□□ 0.89
TDP1-205ENST00000553527 REEP1Q9H902 201 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 C20orf141Q9NUB4 165 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 TMCC3Q9ULS5 477 aa20.61■□□□□ 0.89
TDP1-205ENST00000553527 ANKRD65E5RJM6 399 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 E7EQL1 145 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 TNFRSF11BO00300 401 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 ASAH2BP0C7U1 165 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 IFI30P13284 250 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 CDKN1AP38936 164 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 CAPZA2P47755 286 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 SH3BGRP55822 239 aaPredicted RBP20.6■□□□□ 0.89
TDP1-205ENST00000553527 MELKQ14680 651 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 TBPL2Q6SJ96 375 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 SLC35D2Q76EJ3 337 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 SLC46A3Q7Z3Q1 461 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 ANKK1Q8NFD2 765 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 DUS3LQ96G46 650 aaKnown RBP20.6■□□□□ 0.89
TDP1-205ENST00000553527 NELFAQ9H3P2 528 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 KRCC1Q9NPI7 259 aaPredicted RBP20.6■□□□□ 0.89
TDP1-205ENST00000553527 B3GAT2Q9NPZ5 323 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 LYVE1Q9Y5Y7 322 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 PLCE1Q9P212 2302 aa20.6■□□□□ 0.89
TDP1-205ENST00000553527 ACANP16112 2415 aa20.59■□□□□ 0.89
TDP1-205ENST00000553527 HTR3EA5X5Y0 456 aa20.59■□□□□ 0.89
TDP1-205ENST00000553527 GNGT2O14610 69 aa20.59■□□□□ 0.89
TDP1-205ENST00000553527 TIPRLO75663 272 aa20.59■□□□□ 0.89
TDP1-205ENST00000553527 OR7A10O76100 309 aa20.59■□□□□ 0.89
TDP1-205ENST00000553527 ATP5J2P56134 94 aa20.59■□□□□ 0.89
TDP1-205ENST00000553527 LSM11P83369 360 aaKnown RBP eCLIP20.59■□□□□ 0.89
TDP1-205ENST00000553527 ZP4Q12836 540 aa20.59■□□□□ 0.89
TDP1-205ENST00000553527 SEC23BQ15437 767 aa20.59■□□□□ 0.89
TDP1-205ENST00000553527 C10orf67Q8IYJ2 551 aa20.59■□□□□ 0.89
TDP1-205ENST00000553527 OR4K5Q8NGD3 323 aa20.59■□□□□ 0.89
TDP1-205ENST00000553527 BPIFA2Q96DR5 249 aa20.59■□□□□ 0.89
TDP1-205ENST00000553527 Q96MF0 132 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms