RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 SPIBQ01892 262 aa16.14■□□□□ 0.17
CPSF2-202ENST00000553427 MELKQ14680 651 aa16.14■□□□□ 0.17
CPSF2-202ENST00000553427 SEC23BQ15437 767 aa16.14■□□□□ 0.17
CPSF2-202ENST00000553427 HIST3H3Q16695 136 aa16.14■□□□□ 0.17
CPSF2-202ENST00000553427 C3orf36Q3SXR2 165 aa16.14■□□□□ 0.17
CPSF2-202ENST00000553427 FAM205BPQ63HN1 556 aa16.14■□□□□ 0.17
CPSF2-202ENST00000553427 PGM2L1Q6PCE3 622 aa16.14■□□□□ 0.17
CPSF2-202ENST00000553427 LRRC75AQ8NAA5 344 aa16.14■□□□□ 0.17
CPSF2-202ENST00000553427 OR4K5Q8NGD3 323 aa16.14■□□□□ 0.17
CPSF2-202ENST00000553427 OR13C2Q8NGS9 318 aa16.14■□□□□ 0.17
CPSF2-202ENST00000553427 CCDC124Q96CT7 223 aaKnown RBP16.14■□□□□ 0.17
CPSF2-202ENST00000553427 CLPTM1LQ96KA5 538 aa16.14■□□□□ 0.17
CPSF2-202ENST00000553427 TXNIPQ9H3M7 391 aa16.14■□□□□ 0.17
CPSF2-202ENST00000553427 CRNNQ9UBG3 495 aaPredicted RBP16.14■□□□□ 0.17
CPSF2-202ENST00000553427 PLEKHA6Q9Y2H5 1048 aa16.14■□□□□ 0.17
CPSF2-202ENST00000553427 CADP27708 2225 aa16.14■□□□□ 0.17
CPSF2-202ENST00000553427 A0A1W2PR80 420 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 HS3ST1O14792 307 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 KRT36O76013 467 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 GADD45GO95257 159 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 STAMBPO95630 424 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 PLAUP00749 431 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 HOXB6P17509 224 aaKnown RBP16.13■□□□□ 0.17
CPSF2-202ENST00000553427 CD53P19397 219 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 CD40P25942 277 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 ZNF83P51522 516 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 ZNF133P52736 654 aaPredicted RBP16.13■□□□□ 0.17
CPSF2-202ENST00000553427 IST1P53990 364 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 UBE2NP61088 152 aaKnown RBP16.13■□□□□ 0.17
CPSF2-202ENST00000553427 KEAP1Q14145 624 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 LAPTM4AQ15012 233 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 TESK1Q15569 626 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 ZNF611Q8N823 705 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 NOXO1Q8NFA2 376 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 FOXC2Q99958 501 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 NDEL1Q9GZM8 345 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 UBTD1Q9HAC8 227 aa16.13■□□□□ 0.17
CPSF2-202ENST00000553427 CCM2LQ9NUG4 571 aaPredicted RBP16.13■□□□□ 0.17
CPSF2-202ENST00000553427 TRAV27A0A087WT01 109 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 AQP12BA6NM10 295 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 TMCC2O75069 709 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 ENTPD5O75356 428 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 DNAJC8O75937 253 aaPredicted RBP16.12■□□□□ 0.17
CPSF2-202ENST00000553427 ATP5HO75947 161 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 NR2C1P13056 603 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 ACADSP16219 412 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 RRM2P31350 389 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 HMGA2P52926 109 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 RUNX1T1Q06455 604 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 NRN1LQ496H8 165 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 ZNF672Q499Z4 452 aaPredicted RBP16.12■□□□□ 0.17
CPSF2-202ENST00000553427 ZBED5Q49AG3 693 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 FAM98BQ52LJ0 330 aaKnown RBP16.12■□□□□ 0.17
CPSF2-202ENST00000553427 LRFN4Q6PJG9 635 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 MEX3DQ86XN8 651 aaKnown RBP16.12■□□□□ 0.17
CPSF2-202ENST00000553427 AQP12AQ8IXF9 295 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 OR52J3Q8NH60 311 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 OR51A7Q8NH64 312 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 LILRB1Q8NHL6 650 aaPredicted RBP16.12■□□□□ 0.17
CPSF2-202ENST00000553427 IGFBPL1Q8WX77 278 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 AKAP1Q92667 903 aaKnown RBP eCLIP16.12■□□□□ 0.17
CPSF2-202ENST00000553427 FAM46AQ96IP4 442 aaKnown RBP16.12■□□□□ 0.17
CPSF2-202ENST00000553427 LRGUKQ96M69 825 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 ALPK1Q96QP1 1244 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 TNFRSF13CQ96RJ3 184 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 GPX7Q96SL4 187 aaPredicted RBP16.12■□□□□ 0.17
CPSF2-202ENST00000553427 ALG12Q9BV10 488 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 CXXC4Q9H2H0 198 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 SMURF2Q9HAU4 748 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 POFUT2Q9Y2G5 429 aa16.12■□□□□ 0.17
CPSF2-202ENST00000553427 A0A096LPE4 126 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 A0A1W2PPZ6 126 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 SHISA9B4DS77 424 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 ABCD4O14678 606 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 TRMUO75648 421 aaKnown RBP16.11■□□□□ 0.17
CPSF2-202ENST00000553427 IGKV3-15P01624 115 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 IGLV1-44P01699 117 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 IFNGR2P38484 337 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 RASSF2P50749 326 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 CLRN1P58418 232 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 RPL27P61353 136 aaKnown RBP16.11■□□□□ 0.17
CPSF2-202ENST00000553427 CHRNB3Q05901 458 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 C10orf128Q5T292 105 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 ZNF813Q6ZN06 617 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 KBTBD8Q8NFY9 601 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 ZNF519Q8TB69 540 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 FNDC8Q8TC99 324 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 PIGTQ969N2 578 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 NMD3Q96D46 503 aaKnown RBP16.11■□□□□ 0.17
CPSF2-202ENST00000553427 FOXB1Q99853 325 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 BEX4Q9NWD9 120 aaPredicted RBP16.11■□□□□ 0.17
CPSF2-202ENST00000553427 SIGLEC7Q9Y286 467 aa16.11■□□□□ 0.17
CPSF2-202ENST00000553427 A6NIZ1 184 aa16.1■□□□□ 0.17
CPSF2-202ENST00000553427 M0R1B8 84 aa16.1■□□□□ 0.17
CPSF2-202ENST00000553427 DHHO43323 396 aa16.1■□□□□ 0.17
CPSF2-202ENST00000553427 PTP4A3O75365 173 aa16.1■□□□□ 0.17
CPSF2-202ENST00000553427 CD14P08571 375 aa16.1■□□□□ 0.17
CPSF2-202ENST00000553427 ZNF26P17031 533 aaPredicted RBP16.1■□□□□ 0.17
CPSF2-202ENST00000553427 FPR3P25089 353 aa16.1■□□□□ 0.17
CPSF2-202ENST00000553427 CTXN1P60606 82 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms