RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 LINC01560Q8TB33 94 aa9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 NINJ1Q92982 152 aa9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 GTPBP3Q969Y2 492 aaKnown RBP9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 SNX18Q96RF0 628 aa9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 DGCR6LQ9BY27 220 aa9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 PRRG3Q9BZD7 231 aa9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 GPR35Q9HC97 309 aa9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 SLC17A5Q9NRA2 495 aa9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 C20orf141Q9NUB4 165 aa9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 ARMC1Q9NVT9 282 aa9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 GMPR2Q9P2T1 348 aaKnown RBP9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 PRSS50Q9UI38 385 aa9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 SPEF1Q9Y4P9 236 aa9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 AP4S1Q9Y587 144 aa9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 LYVE1Q9Y5Y7 322 aa9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 SETXQ7Z333 2677 aaKnown RBP9.04□□□□□ -0.96
TRAFD1-208ENST00000552890 ABCA4P78363 2273 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 RAD51DO75771 328 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 SERPINI2O75830 405 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 UBL3O95164 117 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 IFNGP01579 166 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 PGA4P0DJD7 388 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 PGA3P0DJD8 388 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 COL8A1P27658 744 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 SDHAP31040 664 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 OMPP47874 163 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 BLVRAP53004 296 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 CBX1P83916 185 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 PLP2Q04941 152 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 GABPB1Q06547 395 aaPredicted RBP9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 CAMK2DQ13557 499 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 TAB1Q15750 504 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 SLC36A2Q495M3 483 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 IQCCQ4KMZ1 466 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 ZNF787Q6DD87 383 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 ASRGL1Q7L266 308 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 TSPYL5Q86VY4 417 aaPredicted RBP9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 HIPK1Q86Z02 1210 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 ALDH16A1Q8IZ83 802 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 ADGRG5Q8IZF4 528 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 KDM8Q8N371 416 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 LRRC17Q8N6Y2 441 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 FAM86B1Q8N7N1 296 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 NOXO1Q8NFA2 376 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 OR1K1Q8NGR3 316 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 OR51A7Q8NH64 312 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 GIPC3Q8TF64 312 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 CANT1Q8WVQ1 401 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 IPCEF1Q8WWN9 437 aaPredicted RBP9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 TMEM54Q969K7 222 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 PIGTQ969N2 578 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 DUS3LQ96G46 650 aaKnown RBP9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 FAM46AQ96IP4 442 aaKnown RBP9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 ZNF570Q96NI8 536 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 SIGLEC7Q9Y286 467 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 RNF115Q9Y4L5 304 aa9.03□□□□□ -0.96
TRAFD1-208ENST00000552890 UTP20O75691 2785 aaKnown RBP9.02□□□□□ -0.96
TRAFD1-208ENST00000552890 FREM1Q5H8C1 2179 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 TRBV4-1A0A0J9YWV2 114 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 LRRN3E7EW58 273 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 DHHO43323 396 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 FKBP6O75344 327 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 TXNDC12O95881 172 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 HPRP00739 348 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 RENP00797 406 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 IGHV3-9P01782 118 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 CRYAAP02489 173 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 F13BP05160 661 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 ITGA5P08648 1049 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 MAKP20794 623 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 DNASE1P24855 282 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 ACVR1BP36896 505 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 GPR4P46093 362 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 LIMS1P48059 325 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 GSSP48637 474 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 ZNF133P52736 654 aaPredicted RBP9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 CD47Q08722 323 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 FOXD4Q12950 439 aaPredicted RBP9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 LAPTM4AQ15012 233 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 HIST3H3Q16695 136 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 CEACAM16Q2WEN9 425 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 RFX4Q33E94 735 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 C10orf128Q5T292 105 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 ARMC4Q5T2S8 1044 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 ADAM5Q6NVV9 412 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 TMEM53Q6P2H8 277 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 SEZ6L2Q6UXD5 910 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 ZNF813Q6ZN06 617 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 RASSF6Q6ZTQ3 369 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 ZER1Q7Z7L7 766 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 JAZF1Q86VZ6 243 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 WFDC8Q8IUA0 241 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 ZDHHC13Q8IUH4 622 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 ZNF295-AS1Q8N0V1 137 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 SVOPLQ8N434 492 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 OR4F15Q8NGB8 312 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 OR1J2Q8NGS2 313 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 FANK1Q8TC84 345 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 ASB10Q8WXI3 467 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 BCL2L2Q92843 193 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms