RNA–Protein interactions for RNA: ENST00000552346.1

USP15-218, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-218ENST00000552346 ZNF100Q8IYN0 542 aa3.82□□□□□ -1.8
USP15-218ENST00000552346 VN1R2Q8NFZ6 395 aa3.82□□□□□ -1.8
USP15-218ENST00000552346 OR9G4Q8NGQ1 327 aa3.82□□□□□ -1.8
USP15-218ENST00000552346 C7orf33Q8WU49 177 aa3.82□□□□□ -1.8
USP15-218ENST00000552346 FRAT1Q92837 279 aaPredicted RBP3.82□□□□□ -1.8
USP15-218ENST00000552346 CFAP53Q96M91 514 aa3.82□□□□□ -1.8
USP15-218ENST00000552346 NICN1Q9BSH3 213 aa3.82□□□□□ -1.8
USP15-218ENST00000552346 CCNB1IP1Q9NPC3 277 aa3.82□□□□□ -1.8
USP15-218ENST00000552346 ZNF275Q9NSD4 429 aaPredicted RBP3.82□□□□□ -1.8
USP15-218ENST00000552346 AIG1Q9NVV5 245 aa3.82□□□□□ -1.8
USP15-218ENST00000552346 TMEM9Q9P0T7 183 aa3.82□□□□□ -1.8
USP15-218ENST00000552346 ASF1AQ9Y294 204 aa3.82□□□□□ -1.8
USP15-218ENST00000552346 FAM168BA1KXE4 195 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 C12orf77C9JDV5 145 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 TEX46H3BTG2 121 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 EIF4E2O60573 245 aaKnown RBP3.81□□□□□ -1.8
USP15-218ENST00000552346 EEDO75530 441 aaKnown RBP3.81□□□□□ -1.8
USP15-218ENST00000552346 EIF3GO75821 320 aaKnown RBP eCLIP3.81□□□□□ -1.8
USP15-218ENST00000552346 CLPXO76031 633 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 FGFR1OPO95684 399 aaKnown RBP3.81□□□□□ -1.8
USP15-218ENST00000552346 CLIC3O95833 236 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 CRYGCP07315 174 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 PSMB1P20618 241 aaKnown RBP3.81□□□□□ -1.8
USP15-218ENST00000552346 DCKP27707 260 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 GPR6P46095 362 aaPredicted RBP3.81□□□□□ -1.8
USP15-218ENST00000552346 RAB11AP62491 216 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 ADARB1P78563 741 aaKnown RBP3.81□□□□□ -1.8
USP15-218ENST00000552346 WDR43Q15061 677 aaKnown RBP eCLIP3.81□□□□□ -1.8
USP15-218ENST00000552346 RAB11BQ15907 218 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 ZNF239Q16600 458 aaKnown RBP3.81□□□□□ -1.8
USP15-218ENST00000552346 PGGHGQ32M88 737 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 KRTAP13-3Q3SY46 172 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 CASC10Q5T4H9 136 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 GPR157Q5UAW9 335 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 TTC23LQ6PF05 361 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 PRR22Q8IZ63 422 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 PUSL1Q8N0Z8 303 aaKnown RBP3.81□□□□□ -1.8
USP15-218ENST00000552346 PDIK1LQ8N165 341 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 EID2Q8N6I1 236 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 BBS1Q8NFJ9 593 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 OPALINQ96PE5 141 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 XPO6Q96QU8 1125 aaKnown RBP3.81□□□□□ -1.8
USP15-218ENST00000552346 TSG101Q99816 390 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 NAT9Q9BTE0 207 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 POLR2J2Q9GZM3 115 aaKnown RBP3.81□□□□□ -1.8
USP15-218ENST00000552346 POLR2J3Q9H1A7 115 aaKnown RBP3.81□□□□□ -1.8
USP15-218ENST00000552346 RGCCQ9H4X1 137 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 CHRAC1Q9NRG0 131 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 QPCTLQ9NXS2 382 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 AHSPQ9NZD4 102 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 ZNF107Q9UII5 783 aaPredicted RBP3.81□□□□□ -1.8
USP15-218ENST00000552346 SLC17A4Q9Y2C5 497 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 CHD4Q14839 1912 aa3.81□□□□□ -1.8
USP15-218ENST00000552346 MROH7-TTC4A0A0A0MT08 1334 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 C12orf71A8MTZ7 269 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 CDC7O00311 574 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 PPP1R2P9O14990 202 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 SRMP19623 302 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 CPN2P22792 545 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 COX7A1P24310 79 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 VDAC2P45880 294 aaPredicted RBP3.8□□□□□ -1.8
USP15-218ENST00000552346 DAOAP59103 153 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 DNAJC3Q13217 504 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 SOHLH1Q5JUK2 328 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 PPM1LQ5SGD2 360 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 HDDC2Q7Z4H3 204 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 C8orf31Q8N9H6 132 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 CXorf40AQ8TE69 158 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 ZNF707Q96C28 371 aaPredicted RBP3.8□□□□□ -1.8
USP15-218ENST00000552346 RARRES2Q99969 163 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 C8orf33Q9H7E9 229 aaPredicted RBP3.8□□□□□ -1.8
USP15-218ENST00000552346 CYP3A43Q9HB55 503 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 RPS10P5Q9NQ39 176 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 SAMSN1Q9NSI8 373 aaKnown RBP3.8□□□□□ -1.8
USP15-218ENST00000552346 XCL2Q9UBD3 114 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 CLCF1Q9UBD9 225 aa3.8□□□□□ -1.8
USP15-218ENST00000552346 ZNF256Q9Y2P7 627 aaPredicted RBP3.8□□□□□ -1.8
USP15-218ENST00000552346 MSH6P52701 1360 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 CNTNAP1P78357 1384 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 TNRQ92752 1358 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 RBMY1BA6NDE4 496 aaKnown RBP3.79□□□□□ -1.8
USP15-218ENST00000552346 RBMY1EA6NEQ0 496 aaKnown RBP3.79□□□□□ -1.8
USP15-218ENST00000552346 EPOPA6NHQ4 379 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 USP27XA6NNY8 438 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 GABRR3A8MPY1 467 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 SPOPO43791 374 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 BBOX1O75936 387 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 SERPINE2P07093 398 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 RBMY1DP0C7P1 496 aaKnown RBP3.79□□□□□ -1.8
USP15-218ENST00000552346 RBMY1A1P0DJD3 496 aaKnown RBP3.79□□□□□ -1.8
USP15-218ENST00000552346 TUBG1P23258 451 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 AQP2P41181 271 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 APOC4P55056 127 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 TAS2R19P59542 299 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 ZNF92Q03936 586 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 RAD51Q06609 339 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 KYAT1Q16773 422 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 ANKRD26P1Q6NSI1 321 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 ZNF620Q6ZNG0 422 aa3.79□□□□□ -1.8
USP15-218ENST00000552346 PEX26Q7Z412 305 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms