RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 NTRK2Q16620 822 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 MS4A18Q3C1V0 323 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 SLC25A53Q5H9E4 307 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 AGAP6Q5VW22 663 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 ZNF517Q6ZMY9 492 aaPredicted RBP12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 AKAP14Q86UN6 197 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 RAB43Q86YS6 212 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 UBQLNLQ8IYU4 475 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 SCAIQ8N9R8 606 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 ZNF248Q8NDW4 579 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 OR4M2Q8NGB6 313 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 OR10G3Q8NGC4 313 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 THEM6Q8WUY1 208 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 HSD17B8Q92506 261 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 DDIT4LQ96D03 193 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 ARL5BQ96KC2 179 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 AGAP4Q96P64 663 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 KCNJ15Q99712 375 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 METTL7AQ9H8H3 244 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 FRRS1LQ9P0K9 344 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 ABRACLQ9P1F3 81 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 IKZF2Q9UKS7 526 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 ALPK2Q86TB3 2170 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 SLC16A7O60669 478 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 PSKH1P11801 424 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 ATF1P18846 271 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 RBMS1P29558 406 aaKnown RBP12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 RPS27P42677 84 aaKnown RBP12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 BLVRAP53004 296 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 TPTEP56180 551 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 PUDPQ08623 228 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 MELKQ14680 651 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 OR7A5Q15622 319 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 FAM198BQ6UWH4 519 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 H1FNTQ75WM6 255 aaPredicted RBP12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 OTOSQ8NHW6 89 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 MR1Q95460 341 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 NXPE2Q96DL1 559 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 RASL10BQ96S79 203 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 AK6Q9Y3D8 172 aaKnown RBP12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 WIF1Q9Y5W5 379 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 B3GALT1Q9Y5Z6 326 aa12.62□□□□□ -0.39
RAB3IP-216ENST00000552199 ANKRD61A6NGH8 418 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 ACOD1A6NK06 481 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 HSPB2A8KAH6 182 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 ZNF593O00488 134 aaPredicted RBP12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 FZD7O75084 574 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 UMODP07911 640 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 HLA-DOBP13765 273 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 ZNF41P51814 821 aaPredicted RBP12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 MAP2K6P52564 334 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 HSPB2Q16082 182 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 BTBD16Q32M84 506 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 RDH10Q8IZV5 341 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 KDM8Q8N371 416 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 TMEM105Q8N8V8 129 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 DTWD2Q8NBA8 298 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 OR5H6Q8NGV6 325 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 OR5AK2Q8NH90 309 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 SPACA9Q96E40 222 aaPredicted RBP12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 MRGPRX4Q96LA9 322 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 DERL3Q96Q80 235 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 SMAD5Q99717 465 aaKnown RBP12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 POTEKPQ9BYX7 375 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 TSPAN10Q9H1Z9 355 aaPredicted RBP12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 SMOC1Q9H4F8 434 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 SLCO1C1Q9NYB5 712 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 NPAP1Q9NZP6 1156 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 KCNG2Q9UJ96 466 aa12.61□□□□□ -0.39
RAB3IP-216ENST00000552199 A0A087WV48 116 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 A6NIZ1 184 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 SHISA8B8ZZ34 492 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 PDCD5O14737 125 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 EFNA2O43921 213 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 LDOC1O95751 146 aaPredicted RBP12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 HLA-DQA2P01906 255 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 IMPDH2P12268 514 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 SNRPBP14678 240 aaKnown RBP12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 CTLA4P16410 223 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 MAGEB1P43366 347 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 KIR2DL3P43628 341 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 MAP2K3P46734 347 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 PITPNBP48739 271 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 RAP1BP61224 184 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 RAP1AP62834 184 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 LPAL2Q16609 132 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 PLPPR5Q32ZL2 321 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 OR2G2Q8NGZ5 317 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 POC1BQ8TC44 478 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 ASB17Q8WXJ9 295 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 NSMAFQ92636 917 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 ORAI1Q96D31 301 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 FOXN4Q96NZ1 517 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 AMELYQ99218 206 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 ULBP3Q9BZM4 244 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 ZNF700Q9H0M5 742 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 MMP28Q9H239 520 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 CHST11Q9NPF2 352 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 MRPL22Q9NWU5 206 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms