RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 BLOC1S5Q8TDH9 187 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 TMEM174Q8WUU8 243 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 HPSE2Q8WWQ2 592 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 TOMM40LQ969M1 308 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 PRAP1Q96NZ9 151 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 EBNA1BP2Q99848 306 aaKnown RBP5.36□□□□□ -1.55
VPS29-210ENST00000552130 PSD2Q9BQI7 771 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 WACQ9BTA9 647 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 TMBIM4Q9HC24 238 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 EML4Q9HC35 981 aaKnown RBP5.36□□□□□ -1.55
VPS29-210ENST00000552130 ASCL3Q9NQ33 180 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 FGFR1OP2Q9NVK5 253 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 MCUBQ9NWR8 336 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 HRASLS2Q9NWW9 162 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 RHBDL2Q9NX52 303 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 CCDC59Q9P031 241 aaKnown RBP5.36□□□□□ -1.55
VPS29-210ENST00000552130 VAPAQ9P0L0 249 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 OPN4Q9UHM6 478 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 AGO1Q9UL18 857 aaKnown RBP5.36□□□□□ -1.55
VPS29-210ENST00000552130 TMCO1Q9UM00 188 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 ZNF337Q9Y3M9 751 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 MMACHCQ9Y4U1 282 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 RAB3GAP2Q9H2M9 1393 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 COL3A1P02461 1466 aaPredicted RBP5.36□□□□□ -1.55
VPS29-210ENST00000552130 NCOA3Q9Y6Q9 1424 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 WDR17Q8IZU2 1322 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 TRBV7-9A0A0J9YWB2 115 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 GLYATL1P3A0A0U1RQE8 302 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 TSPAN11A1L157 253 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 OR5H15A6NDH6 313 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 NKX6-3A6NJ46 265 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 ZNF487B1APH4 448 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 G3V3Y1 287 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 SLC9A3R1O14745 358 aaPredicted RBP5.35□□□□□ -1.55
VPS29-210ENST00000552130 ACOX3O15254 700 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 MAGEB4O15481 346 aaPredicted RBP5.35□□□□□ -1.55
VPS29-210ENST00000552130 TGOLN2O43493 480 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 XPNPEP2O43895 674 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 CXCL13O43927 109 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 ANGPTL1O95841 491 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 TCRBP04435 133 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 FGF3P11487 239 aaPredicted RBP5.35□□□□□ -1.55
VPS29-210ENST00000552130 RNH1P13489 461 aaKnown RBP5.35□□□□□ -1.55
VPS29-210ENST00000552130 MYOGP15173 224 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 CBR1P16152 277 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 M6PRP20645 277 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 TGFBR2P37173 567 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 RFC3P40938 356 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 UGT2B15P54855 530 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 CDH11P55287 796 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 TLE4Q04727 773 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 FLOT2Q14254 428 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 GPNMBQ14956 572 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 POU2AF1Q16633 256 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 TRIM16LQ309B1 348 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 TIGITQ495A1 244 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 PDZD11Q5EBL8 140 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 SPANXN4Q5MJ08 99 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 RESP18Q5W5W9 173 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 TRNP1Q6NT89 227 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 DRAM2Q6UX65 266 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 ZNF793Q6ZN11 406 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 C16orf82Q7Z2V1 217 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 DND1Q8IYX4 353 aaKnown RBP5.35□□□□□ -1.55
VPS29-210ENST00000552130 ABHD12Q8N2K0 398 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 DNAJC22Q8N4W6 341 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 LRRC52Q8N7C0 313 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 OR51F2Q8NH61 342 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 SLC7A13Q8TCU3 470 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 DYNC2LI1Q8TCX1 351 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 CXorf40AQ8TE69 158 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 UFD1Q92890 307 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 FLYWCH2Q96CP2 140 aaKnown RBP5.35□□□□□ -1.55
VPS29-210ENST00000552130 OMA1Q96E52 524 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 YIPF6Q96EC8 236 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 MRPS26Q9BYN8 205 aaKnown RBP5.35□□□□□ -1.55
VPS29-210ENST00000552130 C6orf62Q9GZU0 229 aaPredicted RBP5.35□□□□□ -1.55
VPS29-210ENST00000552130 GAREM1Q9H706 876 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 GUCA1BQ9UMX6 200 aa5.35□□□□□ -1.55
VPS29-210ENST00000552130 TRAV8-7A0A075B6U6 113 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 A0A1B0GVI7 797 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 SEC14L6B5MCN3 397 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 TRDCB7Z8K6 153 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 TCP10L2B9ZVM9 353 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 H3BNH8 94 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 SIGLEC5O15389 551 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 SLC31A1O15431 190 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 SOX15O60248 233 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 SOX30O94993 753 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 TDP2O95551 362 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 ME2P23368 584 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 EDNRAP25101 427 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 YAP1P46937 504 aaKnown RBP5.34□□□□□ -1.55
VPS29-210ENST00000552130 IDH2P48735 452 aaKnown RBP5.34□□□□□ -1.55
VPS29-210ENST00000552130 HCAR3P49019 387 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 PTH2RP49190 550 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 LBX1P52954 281 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 ZP1P60852 638 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 ABCE1P61221 599 aaKnown RBP5.34□□□□□ -1.55
VPS29-210ENST00000552130 PGGHGQ32M88 737 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms