RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 MAST4O15021 2626 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 DPRXA6NFQ7 191 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 RPL36A-HNRNPH2H7BZ11 118 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 M0R1B8 84 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 TRMUO75648 421 aaKnown RBP12.03□□□□□ -0.48
TROAP-213ENST00000550709 KRT36O76013 467 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 QDPRP09417 244 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 PGA4P0DJD7 388 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 PGA3P0DJD8 388 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 ACADSP16219 412 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 CAPZA2P47755 286 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 LIMS1P48059 325 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 NR1H2P55055 460 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 SH3BGRP55822 239 aaPredicted RBP12.03□□□□□ -0.48
TROAP-213ENST00000550709 UBE2NP61088 152 aaKnown RBP12.03□□□□□ -0.48
TROAP-213ENST00000550709 BSPH1Q075Z2 132 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 ARMC4Q5T2S8 1044 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 OR2T5Q6IEZ7 315 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 LRFN4Q6PJG9 635 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 ZNF704Q6ZNC4 412 aaPredicted RBP12.03□□□□□ -0.48
TROAP-213ENST00000550709 C17orf78Q8N4C9 275 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 LRRC75AQ8NAA5 344 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 OR2T29Q8NH02 315 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 POP5Q969H6 163 aaKnown RBP12.03□□□□□ -0.48
TROAP-213ENST00000550709 KATNB1Q9BVA0 655 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 LRMDAQ9H2I8 198 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 TXNIPQ9H3M7 391 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 ESRP2Q9H6T0 727 aaKnown RBP12.03□□□□□ -0.48
TROAP-213ENST00000550709 PLEKHF2Q9H8W4 249 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 VNN3Q9NY84 501 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 PLEKHA6Q9Y2H5 1048 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 AMDHD2Q9Y303 409 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 SAMHD1Q9Y3Z3 626 aaKnown RBP12.03□□□□□ -0.48
TROAP-213ENST00000550709 LYVE1Q9Y5Y7 322 aa12.03□□□□□ -0.48
TROAP-213ENST00000550709 ZNF99A8MXY4 864 aaPredicted RBP12.02□□□□□ -0.49
TROAP-213ENST00000550709 PTP4A3O75365 173 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 WNT11O96014 354 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 CD3EP07766 207 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 B4GALT1P15291 398 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 ACVR1BP36896 505 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 IFNGR2P38484 337 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 RPL27P61353 136 aaKnown RBP12.02□□□□□ -0.49
TROAP-213ENST00000550709 CD47Q08722 323 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 ANKDD1AQ495B1 522 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 NCMAPQ5T1S8 102 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 KLHL17Q6TDP4 642 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 ZNF813Q6ZN06 617 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 HDDC2Q7Z4H3 204 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 CLDN22Q8N7P3 220 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 NOXO1Q8NFA2 376 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 OR9Q2Q8NGE9 314 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 OR4C15Q8NGM1 316 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 HTRA1Q92743 480 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 HDAC2Q92769 488 aaKnown RBP12.02□□□□□ -0.49
TROAP-213ENST00000550709 TSPAN32Q96QS1 320 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 NDEL1Q9GZM8 345 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 REEP1Q9H902 201 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 ITGB1BP2Q9UKP3 347 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 SIGLEC7Q9Y286 467 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 ADAM18Q9Y3Q7 739 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 RNF115Q9Y4L5 304 aa12.02□□□□□ -0.49
TROAP-213ENST00000550709 H7C1C5 153 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 EBAG9O00559 213 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 GNGT2O14610 69 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 DHHO43323 396 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 CCNB2O95067 398 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 NDUFB2O95178 105 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 CST1P01037 141 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 CD14P08571 375 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 HMGA2P52926 109 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 IST1P53990 364 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 LCN6P62502 163 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 TAF11Q15544 211 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 C1orf146Q5VVC0 180 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 ADAM5Q6NVV9 412 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 PGBD2Q6P3X8 592 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 TMEM108Q6UXF1 575 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 THSD4Q6ZMP0 1018 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 SSX8Q7RTT4 187 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 PIAS4Q8N2W9 510 aaPredicted RBP12.01□□□□□ -0.49
TROAP-213ENST00000550709 FANK1Q8TC84 345 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 GNPDA2Q8TDQ7 276 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 NSMAFQ92636 917 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 AKAP1Q92667 903 aaKnown RBP eCLIP12.01□□□□□ -0.49
TROAP-213ENST00000550709 NEUROG1Q92886 237 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 MCHR2Q969V1 340 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 Q96M85 177 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 FOXB1Q99853 325 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 MRPL13Q9BYD1 178 aaKnown RBP12.01□□□□□ -0.49
TROAP-213ENST00000550709 NELFAQ9H3P2 528 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 GRHPRQ9UBQ7 328 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 ROS1P08922 2347 aa12.01□□□□□ -0.49
TROAP-213ENST00000550709 TEX15Q9BXT5 2789 aa12□□□□□ -0.49
TROAP-213ENST00000550709 TCRBV3S1A0A5B6 114 aa12□□□□□ -0.49
TROAP-213ENST00000550709 A6NIZ1 184 aa12□□□□□ -0.49
TROAP-213ENST00000550709 NPIPB13A6NJU9 1138 aa12□□□□□ -0.49
TROAP-213ENST00000550709 NPIPB4C9JG80 1138 aa12□□□□□ -0.49
TROAP-213ENST00000550709 ABCD4O14678 606 aa12□□□□□ -0.49
TROAP-213ENST00000550709 ARHGEF9O43307 516 aa12□□□□□ -0.49
TROAP-213ENST00000550709 SLC2A10O95528 541 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms